RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 LPCAT3Q6P1A2 487 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 CAMKMTQ7Z624 323 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 RASGRP3Q8IV61 690 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR52R1Q8NGF1 315 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 PFN4Q8NHR9 129 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 WDR92Q96MX6 357 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 C12orf10Q9HB07 376 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 KLRF1Q9NZS2 232 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
PCDHGB3-201ENST00000576222 RDH16O75452 317 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 LIMS3P0CW19 117 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 LIMS4P0CW20 117 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CALCBP10092 127 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CBR1P16152 277 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SPI1P17947 270 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 HTR2CP28335 458 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CLDN6P56747 220 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 UBE2IP63279 158 aaKnown RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MFSD13AQ14CX5 517 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 ST3GAL2Q16842 350 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM111BQ6SJ93 734 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SUMF2Q8NBJ7 301 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 PGAM5Q96HS1 289 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR5B12Q96R08 314 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 NXF2Q9GZY0 626 aaKnown RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MIXL1Q9H2W2 232 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 EPHX3Q9H6B9 360 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CRTAPO75718 401 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 RAD51DO75771 328 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CHRM4P08173 479 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CRABP1P29762 137 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 GDI1P31150 447 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 GLO1Q04760 184 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC48A1Q6P1K1 146 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 DPY19L4Q7Z388 723 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 TRAPPC6BQ86SZ2 158 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 GOT1L1Q8NHS2 421 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 TOMM40LQ969M1 308 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 BCL2L10Q9HD36 194 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC16A7O60669 478 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZNF28P17035 718 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CHATP28329 748 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 ALDH3B1P43353 468 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CAV2P51636 162 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 PLCXD2Q0VAA5 305 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FXNQ16595 210 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMEM225Q6GV28 225 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MFSD12Q6NUT3 480 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 C9orf62Q8N4C0 152 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 JSRP1Q96MG2 331 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM83CQ9BQN1 747 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 LMF2Q9BU23 707 aaKnown RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 POFUT1Q9H488 388 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 AIPO00170 330 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CCSO14618 274 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 TMPRSS11DO60235 418 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 B3GALNT1O75752 331 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 HTR3BO95264 441 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 GPR75O95800 540 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 EPXP11678 715 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MAOBP27338 520 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC6A1P30531 599 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MAP2K6P52564 334 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 CCDC71Q8IV32 467 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 HOXB13Q92826 284 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FOXN4Q96NZ1 517 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 MOKQ9UQ07 419 aa12.13□□□□□ -0.47
PCDHGB3-201ENST00000576222 RAG2P55895 527 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 BAMBIQ13145 260 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 INSL4Q14641 139 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 PPA1Q15181 289 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 HMGN3Q15651 99 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 SLC16A9Q7RTY1 509 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR1M1Q8NGA1 313 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 OR4K17Q8NGC6 315 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 GCDHQ92947 438 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 C14orf79Q96F83 325 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 CNTNAP3Q9BZ76 1288 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 KLK11Q9UBX7 282 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 NDRG3Q9UGV2 375 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 IFITM5A6NNB3 132 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 DVL2O14641 736 aa12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 MAGEB4O15481 346 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB3-201ENST00000576222 RNGTTO60942 597 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms