RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PEX11AO75192 247 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 DEAF1O75398 565 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 VAMP5O95183 116 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 FSHBP01225 129 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 CHRM4P08173 479 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 MAPK1P28482 360 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 GCAP28676 217 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 GLRXP35754 106 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 RAD52P43351 418 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 MAGEB1P43366 347 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 MAP2K6P52564 334 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 TRMT5Q32P41 509 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 PRAMEF8Q5VWM4 474 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 PRAMEF7Q5VXH5 474 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 AP1ARQ63HQ0 302 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 LEG1Q6P5S2 330 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 DOK3Q7L591 496 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 KDM8Q8N371 416 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 ROPN1LQ96C74 230 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZNF837Q96EG3 531 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 DNAJC15Q9Y5T4 150 aa13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 KMT2CQ8NEZ4 4911 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-211ENST00000575783 RNF103-CHMP3A0A140T963 221 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZNF432O94892 652 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 HLA-HP01893 362 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 CD79AP11912 226 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 MDKP21741 143 aaPredicted RBP13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 GATA3P23771 443 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 P2RY4P51582 365 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 CLDN17P56750 224 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 DNAJB13P59910 316 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 CCL8P80075 99 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 PIGFQ07326 219 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 SRSF4Q08170 494 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 BNIP2Q12982 314 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 OCLNQ16625 522 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 CEACAM16Q2WEN9 425 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 GPAT3Q53EU6 434 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 TNFAIP8L2Q6P589 184 aaPredicted RBP13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 CLECL1Q8IZS7 167 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 GPR137CQ8N3F9 429 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 OIT3Q8WWZ8 545 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 SLC25A28Q96A46 364 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 C1orf147Q96MC9 270 aaPredicted RBP13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 DUSP26Q9BV47 211 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZNF385DQ9H6B1 395 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZMAT3Q9HA38 289 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 GPR35Q9HC97 309 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 POLE3Q9NRF9 147 aa13.9□□□□□ -0.18
CTDNEP1-211ENST00000575783 RPL36A-HNRNPH2H7BZ11 118 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 ALX3O95076 343 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 AGR2O95994 175 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 IGHV2-5P01817 119 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF35P13682 527 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 OMGP23515 440 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 LCN2P80188 198 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 GALK2Q01415 458 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 NKPD1Q17RQ9 610 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 CCDC36Q8IYA8 594 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 BCL6BQ8N143 479 aaPredicted RBP13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 CCDC63Q8NA47 563 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 ACMSDQ8TDX5 336 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 IFT81Q8WYA0 676 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 CCT8L2Q96SF2 557 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 GPA33Q99795 319 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 PDP1Q9P0J1 537 aaPredicted RBP13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF69Q9UC07 566 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZNF346Q9UL40 294 aaKnown RBP13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 RASD1Q9Y272 281 aa13.89□□□□□ -0.19
CTDNEP1-211ENST00000575783 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 SLC43A1O75387 559 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 LYPLA1O75608 230 aaPredicted RBP13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 PROCP04070 461 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 RNASE1P07998 156 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 UQCRBP14927 111 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 GCH1P30793 250 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 PCGF2P35227 344 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 HPCAP84074 193 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 FUT5Q11128 374 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 IL23RQ5VWK5 629 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 KANK2Q63ZY3 851 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 RNF165Q6ZSG1 346 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 ZCCHC23Q6ZST2 131 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 RETREG3Q86VR2 466 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 WDFY1Q8IWB7 410 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 MGARPQ8TDB4 240 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 TWIST2Q8WVJ9 160 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 PPP3R2Q96LZ3 170 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 B3GNT2Q9NY97 397 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 NUP50Q9UKX7 468 aa13.88□□□□□ -0.19
CTDNEP1-211ENST00000575783 GUSBP08236 651 aa13.87□□□□□ -0.19
CTDNEP1-211ENST00000575783 CPA3P15088 417 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms