RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SLC30A2Q9BRI3 323 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 MRI1Q9BV20 369 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 SF3B5Q9BWJ5 86 aaKnown RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 C1QTNF3Q9BXJ4 246 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 LAT2Q9GZY6 243 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 MRPL46Q9H2W6 279 aaKnown RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 PIF1Q9H611 641 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 CTPS2Q9NRF8 586 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PSMC3IPQ9P2W1 217 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 ZNF69Q9UC07 566 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 GPR160Q9UJ42 338 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ZNF225Q9UK10 706 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 FAF1Q9UNN5 650 aaPredicted RBP5.04□□□□□ -1.6
SMG6-219ENST00000575663 TRAPPC4Q9Y296 219 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 AUP1Q9Y679 476 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 ARFGEF3Q5TH69 2177 aa5.04□□□□□ -1.6
SMG6-219ENST00000575663 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 IGHV1-69-2A0A0G2JMI3 117 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 CLPSL1A2RUU4 121 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 ISPDA4D126 451 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NPIPB9F8W1W9 429 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NR5A2O00482 541 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 DNAJA2O60884 412 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 FOXH1O75593 365 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NCR1O76036 304 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 SEC14L2O76054 403 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NGFP01138 241 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 HMGN2P05204 90 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 CELA3BP08861 270 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 SNRPAP09012 282 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 BCKDHAP12694 445 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 TAC1P20366 129 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NR4A1P22736 598 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 LSP1P33241 339 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 GLRXP35754 106 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 RPS6KA3P51812 740 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 PKNOX1P55347 436 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 SELENOVP59797 346 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 LCN2P80188 198 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 SRSF4Q08170 494 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 MAD2L1BPQ15013 274 aaPredicted RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 TRMT5Q32P41 509 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 BEAN1Q3B7T3 259 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 PCGF3Q3KNV8 242 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 ASPHD2Q6ICH7 369 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 ANKRD26P1Q6NSI1 321 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 TMEM154Q6P9G4 183 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 RHOUQ7L0Q8 258 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 EIF3MQ7L2H7 374 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 MYPOPQ86VE0 399 aaPredicted RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 CCDC36Q8IYA8 594 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 GLB1L3Q8NCI6 653 aaPredicted RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 OR9K2Q8NGE7 335 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 TAF15Q92804 592 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMG6-219ENST00000575663 RAB1CQ92928 201 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 ZNF524Q96C55 264 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 FAM120BQ96EK7 910 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 C16orf58Q96GQ5 468 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 ZNF48Q96MX3 618 aaPredicted RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 ZNF385AQ96PM9 386 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 MRPL57Q9BQC6 102 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 ACTRT3Q9BYD9 372 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 OR11A1Q9GZK7 315 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 NMUR2Q9GZQ4 415 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 SH3BP4Q9P0V3 963 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 PURGQ9UJV8 347 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 SLC35A3Q9Y2D2 325 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 RRP15Q9Y3B9 282 aaKnown RBP5.03□□□□□ -1.6
SMG6-219ENST00000575663 WIPI2Q9Y4P8 454 aa5.03□□□□□ -1.6
SMG6-219ENST00000575663 TMEM238LA0A1B0GVL6 79 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 SERTM1A2A2V5 107 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 AGAP5A6NIR3 686 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 AQP7P3A6NL99 342 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 H3BQF6 201 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 TM9SF1O15321 606 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 CDC14BO60729 498 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 TBX19O60806 448 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 CRCPO75575 148 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 ZNF432O94892 652 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 NDUFA7O95182 113 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 TSPAN15O95858 294 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 GPANK1O95872 356 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 AK1P00568 194 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 MT-ND5P03915 603 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 SHBGP04278 402 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 GPIP06744 558 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 GSTA1P08263 222 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 VSIG8P0DPA2 414 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 VAMP1P23763 118 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 FRKP42685 505 aaPredicted RBP5.02□□□□□ -1.61
SMG6-219ENST00000575663 CRYBB2P43320 205 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 MAGEB1P43366 347 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 CCT5P48643 541 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 SELENOPP49908 381 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 MAP2K6P52564 334 aa5.02□□□□□ -1.61
SMG6-219ENST00000575663 SEC24CP53992 1094 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms