RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ADPRHL2Q9NX46 363 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 GPR160Q9UJ42 338 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 FBXL3Q9UKT7 428 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 ZNF346Q9UL40 294 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 RCE1Q9Y256 329 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 PCDHGB1Q9Y5G3 927 aa7.75□□□□□ -1.17
SMG6-218ENST00000575454 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
SMG6-218ENST00000575454 LOC105371242A0A075B767 164 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 PRSS51A0A1B0GVH4 220 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 CLDN24A6NM45 220 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 AP3D1O14617 1153 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 AKAP8O43823 692 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 ZNF432O94892 652 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 HPXP02790 462 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 DBIP07108 87 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 CHRM4P08173 479 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 TFPTP0C1Z6 253 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 HKR1P10072 659 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 G6PDP11413 515 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 IL7RP16871 459 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 ZNF43P17038 809 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 COL8A2P25067 703 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 LSP1P33241 339 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 GLRXP35754 106 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 CHI3L1P36222 383 aaPredicted RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 CAPZA2P47755 286 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 P2RY4P51582 365 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 LMO4P61968 165 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 EMX2Q04743 252 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 EPS8Q12929 822 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 SMU1Q2TAY7 513 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 TRMT5Q32P41 509 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 GKAP1Q5VSY0 366 aaPredicted RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 WBP2NLQ6ICG8 309 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 KRT80Q6KB66 452 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 TNFAIP8L2Q6P589 184 aaPredicted RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 TREML4Q6UXN2 200 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 LRRC74BQ6ZQY2 392 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 LINGO2Q7L985 606 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 OLIG3Q7RTU3 272 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 MDP1Q86V88 176 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 EPHX4Q8IUS5 362 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 CLEC4FQ8N1N0 589 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 GPR137CQ8N3F9 429 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 PIK3C3Q8NEB9 887 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 OR8J2Q8NGG1 315 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 MGARPQ8TDB4 240 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 RAB8BQ92930 207 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 RAB39BQ96DA2 213 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 NEURL3Q96EH8 262 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 MRPL37Q9BZE1 423 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 NARFLQ9H6Q4 476 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 SEC61A2Q9H9S3 476 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 ZMAT3Q9HA38 289 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 G6PC2Q9NQR9 355 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 ASIC5Q9NY37 505 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 NOP53Q9NZM5 478 aaKnown RBP7.74□□□□□ -1.17
SMG6-218ENST00000575454 MALRD1Q5VYJ5 2156 aa7.74□□□□□ -1.17
SMG6-218ENST00000575454 RYR3Q15413 4870 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 ZNF99A8MXY4 864 aaPredicted RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 TMEM233B4DJY2 109 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 CHRNGP07510 517 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 CELA3BP08861 270 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 KRT4P19013 534 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 GTF2E2P29084 291 aaKnown RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 SELENOVP59797 346 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 UBA52P62987 128 aaKnown RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 GALK2Q01415 458 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 TEKQ02763 1124 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 C1DQ13901 141 aaKnown RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 PCGF3Q3KNV8 242 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 C1orf140Q5VVS0 124 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 SAXO2Q658L1 398 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 OR4F3Q6IEY1 312 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 ZCCHC23Q6ZST2 131 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 SNX32Q86XE0 403 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 IFT20Q8IY31 132 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 PEX5LQ8IYB4 626 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 GSPT2Q8IYD1 628 aaKnown RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 CLECL1Q8IZS7 167 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 TRIML2Q8N7C3 387 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 MFSD8Q8NHS3 518 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 STK35Q8TDR2 534 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 TUBGCP3Q96CW5 907 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 SLC6A7Q99884 636 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 NELFAQ9H3P2 528 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 ZNF665Q9H7R5 613 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 GPR35Q9HC97 309 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 ZNF275Q9NSD4 429 aaPredicted RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 MARCOQ9UEW3 520 aaPredicted RBP7.73□□□□□ -1.17
SMG6-218ENST00000575454 GIMAP2Q9UG22 337 aa7.73□□□□□ -1.17
SMG6-218ENST00000575454 A0A1W2PPW3 197 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 HMGN4O00479 90 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 FRS3O43559 492 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 PLPP2O43688 288 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 OR2T1O43869 369 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 MPZL1O95297 269 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 AHSA1O95433 338 aa7.72□□□□□ -1.17
SMG6-218ENST00000575454 TCN1P20061 433 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms