RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SAP130Q9H0E3 1048 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 ESRP2Q9H6T0 727 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 TPT1P8Q9HAU6 139 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 BCO1Q9HAY6 547 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 EXOSC3Q9NQT5 275 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 DCAF13Q9NV06 445 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 PRSS50Q9UI38 385 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 LIPT1Q9Y234 373 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 ANGPT4Q9Y264 503 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 RNF115Q9Y4L5 304 aa8.57□□□□□ -1.04
NPLOC4-216ENST00000574344 PRAMEF27A3QJZ7 478 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 SOCS2O14508 198 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 AP3D1O14617 1153 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 HS3ST1O14792 307 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 SMAD7O15105 426 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 C1QCP02747 245 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 FABP3P05413 133 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 BCHEP06276 602 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CD3EP07766 207 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CHRM4P08173 479 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 GUSBP08236 651 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 GPX2P18283 190 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CAPGP40121 348 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CRATP43155 626 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 HTR3AP46098 478 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 PTH2RP49190 550 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 ALDH3A2P51648 485 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 OR2B6P58173 313 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 RBBP4Q09028 425 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 DAG1Q14118 895 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 P2RY6Q15077 328 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 TAB1Q15750 504 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 RFX4Q33E94 735 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 COX20Q5RI15 118 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 MRPL2Q5T653 305 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 ABLIM2Q6H8Q1 611 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 UGT2A3Q6UWM9 527 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CLEC9AQ6UXN8 241 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 Q6ZT83 130 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 HIPK1Q86Z02 1210 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 EPHX4Q8IUS5 362 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CMIPQ8IY22 773 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 PEX5LQ8IYB4 626 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 DHRSXQ8N5I4 330 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF555Q8NEP9 628 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 PIGXQ8TBF5 258 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CYGBQ8WWM9 190 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 HSD17B8Q92506 261 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 AKAP1Q92667 903 aaKnown RBP eCLIP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 DDIT4LQ96D03 193 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 ZG16BQ96DA0 208 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 PYURFQ96I23 114 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 SMR3AQ99954 134 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 RBM4BQ9BQ04 359 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 RBM4Q9BWF3 364 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 POTEKPQ9BYX7 375 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 OR11A1Q9GZK7 315 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 SLC38A1Q9H2H9 487 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 IKZF5Q9H5V7 419 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF696Q9H7X3 374 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 NDUFA13Q9P0J0 144 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 KIF17Q9P2E2 1029 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 USP22Q9UPT9 525 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 LAMP3Q9UQV4 416 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 MYRFQ9Y2G1 1151 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 NOSIPQ9Y314 301 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 HDGFL3Q9Y3E1 203 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 GMEB1Q9Y692 573 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 USF3Q68DE3 2245 aa8.56□□□□□ -1.04
NPLOC4-216ENST00000574344 TMED7-TICAM2A0A0A6YYA0 188 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 SMIM31A0A1B0GVY4 71 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CIB4A0PJX0 185 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 AGAP5A6NIR3 686 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF724A8MTY0 619 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ZNF814B7Z6K7 855 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 C5orf58C9J3I9 102 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 G3V2T6 193 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 H0YAE9 185 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 H7C1Q1 480 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 PMS2P2O95744 297 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CLPTM1O96005 669 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 IGHV3-9P01782 118 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 MT-ND1P03886 318 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 DBIP07108 87 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 THRBP10828 461 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 ETFAP13804 333 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 FKBP2P26885 142 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 MAGEA8P43361 318 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 CRISP3P54108 245 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 RAD23AP54725 363 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 DSTNP60981 165 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 PPA1Q15181 289 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 LIN52Q52LA3 116 aa8.55□□□□□ -1.04
NPLOC4-216ENST00000574344 TTC33Q6PID6 262 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms