RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 LOC100506127A0A0U1RQW1 187 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 MLF1P58340 268 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 CHAF1BQ13112 559 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 GALEQ14376 348 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 LCN1P1Q5VSP4 162 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 LIPKQ5VXJ0 399 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 TMEM99Q8N816 258 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 POMGNT2Q8NAT1 580 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 OR5J2Q8NH18 312 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 RASD2Q96D21 266 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 MRGPRX4Q96LA9 322 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 Q96M85 177 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 NMNAT3Q96T66 252 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 TIMP4Q99727 224 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 HRH3Q9Y5N1 445 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 PMF1-BGLAPU3KQ54 211 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 TEX13CA0A0J9YWL9 993 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 OR6C68A6NDL8 312 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 DXOO77932 396 aaKnown RBP25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 AHSA1O95433 338 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 HPP00738 406 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 CD79BP40259 229 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 DIO1P49895 249 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 ACTC1P68032 377 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 ACTA1P68133 377 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 ARSKQ6UWY0 536 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 TMPRSS11AQ6ZMR5 421 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 RPS19BP1Q86WX3 136 aaKnown RBP25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 ASPNQ9BXN1 380 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 SIAEQ9HAT2 523 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 FOXJ2Q9P0K8 574 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 SF3B6Q9Y3B4 125 aaKnown RBP25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 A3GALT2U3KPV4 340 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 KNTC1P50748 2209 aa25.71■■□□□ 1.71
CTDNEP1-210ENST00000574322 SPTBN2O15020 2390 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 FTCDNL1E5RQL4 147 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 SLC16A1P53985 500 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 RPS15P62841 145 aaKnown RBP25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 SOWAHCQ53LP3 525 aaPredicted RBP25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 FADS6Q8N9I5 356 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 OR2M3Q8NG83 312 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 UFD1Q92890 307 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 GPR87Q9BY21 358 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 SH2D2AQ9NP31 389 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 SDK2Q58EX2 2172 aa25.7■■□□□ 1.7
CTDNEP1-210ENST00000574322 AKAP8O43823 692 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 GYPBP06028 91 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 CDKN2AP42771 156 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 SSR4P51571 173 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 RPS18P62269 152 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 MFSD13AQ14CX5 517 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 PON3Q15166 354 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 PLPPR5Q32ZL2 321 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 EXD3Q8N9H8 876 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 ASB15Q8WXK1 588 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 CDCP1Q9H5V8 836 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 SLC24A3Q9HC58 644 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 MRPL39Q9NYK5 338 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 CCDC59Q9P031 241 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 CPAMD8Q8IZJ3 1885 aa25.69■■□□□ 1.7
CTDNEP1-210ENST00000574322 DAPL1A0PJW8 107 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 C21orf140B9A014 251 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 TERTO14746 1132 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 FZD7O75084 574 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 F13BP05160 661 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 SPI1P17947 270 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 CAPZA2P47755 286 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF41P51814 821 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 RPS3AP61247 264 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 DCTN2Q13561 401 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 H3F3CQ6NXT2 135 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 LSM14AQ8ND56 463 aaKnown RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 SPRYD4Q8WW59 207 aaPredicted RBP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 SMPDL3BQ92485 455 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ALG8Q9BVK2 526 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 POTEKPQ9BYX7 375 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 GRHPRQ9UBQ7 328 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 LALBAP00709 142 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 IDUAP35475 653 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ENTPD1P49961 510 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 GPR50Q13585 617 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ADCK1Q86TW2 530 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 JAZF1Q86VZ6 243 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 MFSD8Q8NHS3 518 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 TSPAN32Q96QS1 320 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 NPAS1Q99742 590 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ANGPTL4Q9BY76 406 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 OR11A1Q9GZK7 315 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 RNF167Q9H6Y7 350 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 ASB6Q9NWX5 421 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 KLK13Q9UKR3 277 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 NOX1Q9Y5S8 564 aa25.68■■□□□ 1.7
CTDNEP1-210ENST00000574322 GRPRP30550 384 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 OTX2P32243 289 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 FOXF1Q12946 379 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 LEG1Q6P5S2 330 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 CD200R1LQ6Q8B3 271 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 IL20RBQ6UXL0 311 aa25.67■■□□□ 1.7
CTDNEP1-210ENST00000574322 WDSUB1Q8N9V3 476 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms