RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FBXW9Q5XUX1 488 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 GLYATQ6IB77 296 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 C8orf82Q6P1X6 216 aaPredicted RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 C6orf89Q6UWU4 347 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 Q6ZT83 130 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 H1FNTQ75WM6 255 aaPredicted RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 HIST3H2AQ7L7L0 130 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 AAED1Q7RTV5 226 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 DEFB107AQ8IZN7 70 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 PGAM4Q8N0Y7 254 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 OR9K2Q8NGE7 335 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 OR4D11Q8NGI4 311 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 BCAS4Q8TDM0 211 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 NINJ1Q92982 152 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 HIST1H2ACQ93077 130 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 SLC41A3Q96GZ6 507 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 MPP4Q96JB8 637 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 CDRT15Q96T59 188 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 TMEM43Q9BTV4 400 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 SF3B5Q9BWJ5 86 aaKnown RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 ACTR6Q9GZN1 396 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 CLEC4MQ9H2X3 399 aaPredicted RBP6.89□□□□□ -1.31
SMG6-211ENST00000572369 ASB6Q9NWX5 421 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 RASD1Q9Y272 281 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 GPR52Q9Y2T5 361 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 TESMINQ9Y4I5 508 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 FLVCR1Q9Y5Y0 555 aa6.89□□□□□ -1.31
SMG6-211ENST00000572369 PRRC2AP48634 2157 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 IGKV1D-42A0A075B6H8 117 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 B2RBV5 119 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 M0R082 166 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 AKAP8O43823 692 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 NPIPB7O75200 414 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CTAG2O75638 210 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 SERPINI2O75830 405 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CH25HO95992 272 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 F12P00748 615 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 MT-ATP6P00846 226 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 IFNW1P05000 195 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 HEXAP06865 529 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ADORA3P0DMS8 318 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 GGT1P19440 569 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 PSMB1P20618 241 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 HOXC12P31275 282 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 DNAJA1P31689 397 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 PCYT1AP49585 367 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CRYBA2P53672 197 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 SLC16A1P53985 500 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CLDN17P56750 224 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ST3GAL3Q11203 375 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 PIN1Q13526 163 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 KRT72Q14CN4 511 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 IFI44LQ53G44 452 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 SFRP5Q5T4F7 317 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 C9orf135Q5VTT2 229 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 NIPAL3Q6P499 406 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CLEC9AQ6UXN8 241 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 STAC2Q6ZMT1 411 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 CBLL1Q75N03 491 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 RRM2BQ7LG56 351 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 BHLHA15Q7RTS1 189 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 ABHD12BQ7Z5M8 362 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 CYP4Z1Q86W10 505 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 KDM8Q8N371 416 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 FITM2Q8N6M3 262 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 FAM156AQ8NDB6 213 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 OR6S1Q8NH40 331 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ZNF417Q8TAU3 575 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 GEMIN6Q8WXD5 167 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 S100PBPQ96BU1 408 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 PIK3IP1Q96FE7 263 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 HSH2DQ96JZ2 352 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 OXGR1Q96P68 337 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ZNF587Q96SQ5 575 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 PTDSS2Q9BVG9 487 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 FNDC11Q9BVV2 318 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 POLR2J2Q9GZM3 115 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 POLR2J3Q9H1A7 115 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 NGBQ9NPG2 151 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 RASSF1Q9NS23 344 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ABCD2Q9UBJ2 740 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 MAGEL2Q9UJ55 1249 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 RIMS3Q9UJD0 308 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 ING1Q9UK53 422 aaPredicted RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 EDARQ9UNE0 448 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 SAMD4AQ9UPU9 718 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 B3GALT5Q9Y2C3 310 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 FAM32AQ9Y421 112 aaKnown RBP6.88□□□□□ -1.31
SMG6-211ENST00000572369 V9GYQ6 96 aa6.88□□□□□ -1.31
SMG6-211ENST00000572369 TLN2Q9Y4G6 2542 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 FREM1Q5H8C1 2179 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 FTCDNL1E5RQL4 147 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 LRRN3E7EW58 273 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 C11orf98E9PRG8 122 aa6.87□□□□□ -1.31
SMG6-211ENST00000572369 SLC43A1O75387 559 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms