RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ZC3H14Q6PJT7 736 aaKnown RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ZAR1Q86SH2 424 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF227Q86WZ6 799 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 OR5AK2Q8NH90 309 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 THEM6Q8WUY1 208 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 HMGB4Q8WW32 186 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 FGF13Q92913 245 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 KRBOX1C9JBD0 128 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 TNFSF14O43557 240 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ZNF432O94892 652 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 NGFRP08138 427 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 S100A11P31949 105 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ACAA2P42765 397 aaKnown RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 GRK6P43250 576 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 MNX1P50219 401 aaPredicted RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 TAS2R20P59543 309 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PPP2CBP62714 309 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ERVK-25P63136 954 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 PPP2CAP67775 309 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 CBFBQ13951 182 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 NHLRC3Q5JS37 347 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 LEG1Q6P5S2 330 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 TMPRSS12Q86WS5 348 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 GLB1L2Q8IW92 636 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 COQ8AQ8NI60 647 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 ADAD1Q96M93 576 aaKnown RBP9.86□□□□□ -0.83
CCDC40-207ENST00000572253 OBP2AQ9NY56 170 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 CA5BQ9Y2D0 317 aa9.86□□□□□ -0.83
CCDC40-207ENST00000572253 OR6C74A6NCV1 312 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 MCRIP1C9JLW8 97 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 PSMD9O00233 223 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 DCTDP32321 178 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 SOX2P48431 317 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 RBMS2Q15434 407 aaKnown RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 TMEM255AQ5JRV8 349 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 KIRREL2Q6UWL6 708 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 STAC2Q6ZMT1 411 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 SCARB1Q8WTV0 552 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ALG12Q9BV10 488 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 COMMD4Q9H0A8 199 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 GLS2Q9UI32 602 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 BRCA2P51587 3418 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 FXYD6-FXYD2A0A087WZ82 144 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 EFCAB7A8K855 629 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 G3V3Q6 166 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ZFPL1O95159 310 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CT62P0C5K7 136 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 SLC35E2P0CK97 266 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 PPP3CBP16298 524 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CXCL2P19875 107 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 MNDAP41218 407 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 SEC61A1P61619 476 aaKnown RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 OR5M10Q6IEU7 315 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 C11orf88Q6PI97 169 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 NPEPL1Q8NDH3 523 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 G6PC3Q9BUM1 346 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ARL6Q9H0F7 186 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 FXYD6Q9H0Q3 95 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CCDC86Q9H6F5 360 aaKnown RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 TMEM138Q9NPI0 162 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 PIPOXQ9P0Z9 390 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 IKZF2Q9UKS7 526 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 MUC22E2RYF6 1773 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 GRXCR1A8MXD5 290 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ARPC5O15511 151 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CSTAP01040 98 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CSF1P09603 554 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 MAP3K8P41279 467 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ALKBH1Q13686 389 aaKnown RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ENPP2Q13822 863 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 ISXQ2M1V0 245 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 PCGF3Q3KNV8 242 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 FCRL6Q6DN72 434 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 OR5T3Q8NGG3 340 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 TNFAIP8L1Q8WVP5 186 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 RSC1A1Q92681 617 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 RASD2Q96D21 266 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 SCARF2Q96GP6 870 aaPredicted RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 RBM18Q96H35 190 aaKnown RBP9.85□□□□□ -0.83
CCDC40-207ENST00000572253 DPYSL5Q9BPU6 564 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 Q9N2J8 555 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 CA10Q9NS85 328 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 MED9Q9NWA0 146 aa9.85□□□□□ -0.83
CCDC40-207ENST00000572253 OR2A4O95047 310 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 RASGRP1O95267 797 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 ITPKBP27987 946 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 KIAA1024LP59773 190 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 MANEAQ5SRI9 462 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 FAAP20Q6NZ36 180 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 SLC16A9Q7RTY1 509 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 CSNK1A1LQ8N752 337 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 LHFPL5Q8TAF8 219 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OR1E3Q8WZA6 343 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 WDR92Q96MX6 357 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 OR2A7Q96R45 310 aa9.84□□□□□ -0.83
CCDC40-207ENST00000572253 UTP23Q9BRU9 249 aaKnown RBP9.84□□□□□ -0.83
CCDC40-207ENST00000572253 C2orf42Q9NWW7 574 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms