RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TMEFF2Q9UIK5 374 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-209ENST00000571558 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
RPAIN-209ENST00000571558 DNAJC13O75165 2243 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 EI24O14681 340 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF208O43345 1280 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 OR10H3O60404 316 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 GASTP01350 101 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 TCEA1P23193 301 aaKnown RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 UQCRC1P31930 480 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 DAG1Q14118 895 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 HSPB2Q16082 182 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 OTUD3Q5T2D3 398 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 KDM4DQ6B0I6 523 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 TRILQ7L0X0 811 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 PRIMA1Q86XR5 153 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 OR14L1PQ8NHC6 308 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 STK35Q8TDR2 534 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 NANOS1Q8WY41 292 aaKnown RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 C20orf141Q9NUB4 165 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 BEX4Q9NWD9 120 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-209ENST00000571558 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 MED31Q9Y3C7 131 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 ATRQ13535 2644 aa12.29□□□□□ -0.44
RPAIN-209ENST00000571558 HTR3EA5X5Y0 456 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 A8MVM7 634 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 DLGAP1O14490 977 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 DVL2O14641 736 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ARHGEF9O43307 516 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 HCN1O60741 890 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 FZD7O75084 574 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 TRAPPC6AO75865 159 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 HPRP00739 348 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ANXA8P13928 327 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 CCNA2P20248 432 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 MAKP20794 623 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 CHMP24386 653 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 GSSP48637 474 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ASCL1P50553 236 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ALDH3A2P51648 485 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 TOMM20Q15388 145 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 C1orf185Q5T7R7 199 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 RAET1LQ5VY80 246 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 C3orf33Q6P1S2 294 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 CD300LDQ6UXZ3 194 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 TMPRSS11FQ6ZWK6 438 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 MEX3DQ86XN8 651 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 PACRGLQ8N7B6 248 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 PIGXQ8TBF5 258 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 RNASE6Q93091 150 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 BPIFA2Q96DR5 249 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 PTDSS2Q9BVG9 487 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 RBM4Q9BWF3 364 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 KLHL4Q9C0H6 718 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 OR11A1Q9GZK7 315 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SERINC1Q9NRX5 453 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF337Q9Y3M9 751 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 LINC01387J3KSC0 135 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 KPNA4O00629 521 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 CDC42EP2O14613 210 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ADAP00813 363 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 EPXP11678 715 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 FPR3P25089 353 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 FKBP2P26885 142 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SHC1P29353 583 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 IFNGR2P38484 337 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 VHLP40337 213 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 RAC1P63000 192 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SLC10A1Q14973 349 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 C5orf46Q6UWT4 87 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 CXXC5Q7LFL8 322 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SLC46A3Q7Z3Q1 461 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 KIF18BQ86Y91 864 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ATG16L2Q8NAA4 619 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 OR6S1Q8NH40 331 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SLC25A43Q8WUT9 341 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 LIPHQ8WWY8 451 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 TAAR8Q969N4 342 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 FAM46AQ96IP4 442 aaKnown RBP12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ARL5BQ96KC2 179 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 POTEKPQ9BYX7 375 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 SLC6A15Q9H2J7 730 aa12.28□□□□□ -0.44
RPAIN-209ENST00000571558 ZNF629Q9UEG4 869 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms