RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GGNQ86UU5 652 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 MEX3DQ86XN8 651 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SIAH3Q8IW03 269 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC43A2Q8N370 569 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PARP8Q8N3A8 854 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 Q8NA96 180 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADPRHL1Q8NDY3 354 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR2T33Q8NG76 320 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR51A7Q8NH64 312 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF417Q8TAU3 575 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 FAR1Q8WVX9 515 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CYGBQ8WWM9 190 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 OSTF1Q92882 214 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TAAR8Q969N4 342 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF524Q96C55 264 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SNRNP40Q96DI7 357 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PLEKHA8Q96JA3 519 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF570Q96NI8 536 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 MOGAT1Q96PD6 335 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF587Q96SQ5 575 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 BARD1Q99728 777 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 PTDSS2Q9BVG9 487 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 IFT27Q9BW83 186 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 POLDIP3Q9BY77 421 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR52D1Q9H346 318 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 CHST11Q9NPF2 352 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 IMPAD1Q9NX62 359 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 MRPL39Q9NYK5 338 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 EMC3Q9P0I2 261 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 SPRR3Q9UBC9 169 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 TRAPPC4Q9Y296 219 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 B3GALT5Q9Y2C3 310 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 IGF2RP11717 2491 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 KNTC1P50748 2209 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 ASPMQ8IZT6 3477 aa5.91□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A0J9YW62 118 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 A0A1B0GVC2 190 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC22A20A6NK97 555 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 AQP7P3A6NL99 342 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RIIAD1A6NNX1 92 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 FTCDNL1E5RQL4 147 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 C11orf98E9PRG8 122 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 XKRYO14609 159 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CDC42EP2O14613 210 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRRG2O14669 202 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 MITFO75030 526 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 AKR7A3O95154 331 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 VAMP5O95183 116 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 WISP1O95388 367 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 IFNGP01579 166 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ASAH2BP0C7U1 165 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 IMPDH2P12268 514 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 NR2C1P13056 603 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 GABRA1P14867 456 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF43P17038 809 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PTGS2P35354 604 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PTGER4P35408 488 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 DAPP51397 102 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPS6KA3P51812 740 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SMSP52788 366 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CLDN18P56856 261 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RAC3P60763 192 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CDC42P60953 191 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPS4XP62701 263 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 POU3F1Q03052 451 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 RPL18Q07020 188 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 C19orf57Q0VDD7 668 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PON3Q15166 354 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF239Q16600 458 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CTU2Q2VPK5 515 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZIK1Q3SY52 487 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 GXYLT1Q4G148 440 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRR30Q53SZ7 412 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 EEF1A1P5Q5VTE0 462 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 C1QL3Q5VWW1 255 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TMEM225Q6GV28 225 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC27A4Q6P1M0 643 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CASP12Q6UXS9 341 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CD300LDQ6UXZ3 194 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 H1FNTQ75WM6 255 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 FCRLAQ7L513 359 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CD163Q86VB7 1156 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 JAZF1Q86VZ6 243 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 UEVLDQ8IX04 471 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 DHRSXQ8N5I4 330 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CLDN22Q8N7P3 220 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SETD9Q8NE22 299 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 OR5M9Q8NGP3 310 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 CPT1CQ8TCG5 803 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 NRG4Q8WWG1 115 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLC38A2Q96QD8 506 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ZNF184Q99676 751 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TIMP4Q99727 224 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 SLX1AQ9BQ83 275 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 ADI1Q9BV57 179 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TSSK6Q9BXA6 273 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 GABARAPL3Q9BY60 117 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 PRDM14Q9GZV8 571 aa5.9□□□□□ -1.46
CTDNEP1-204ENST00000570484 TOR3AQ9H497 397 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms