RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 COCHO43405 550 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CHST1O43916 411 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TOM1O60784 492 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 JCHAINP01591 159 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 HLA-HP01893 362 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RPLP0P05388 317 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 KRT16P08779 473 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 BCKDHAP12694 445 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RNH1P13489 461 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 POLR2EP19388 210 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 UGT2B10P36537 528 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 SLC1A1P43005 524 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CDC34P49427 236 aaPredicted RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 TMED10P49755 219 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 TMEM50BP56557 158 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 PEX3P56589 373 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RAB40BQ12829 278 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CALCOCO2Q13137 446 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ITPK1Q13572 414 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TSC22D1Q15714 1073 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TRIM16LQ309B1 348 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 UNC50Q53HI1 259 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TCTEX1D4Q5JR98 221 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CDKL4Q5MAI5 379 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 PRR5LQ6MZQ0 368 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TMIGD1Q6UXZ0 262 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 SLC35D2Q76EJ3 337 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 HDDC2Q7Z4H3 204 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ABHD12BQ7Z5M8 362 aaPredicted RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 PIGZQ86VD9 579 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ZBED8Q8IZ13 594 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 KIR3DL3Q8N743 410 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CYB561A3Q8NBI2 242 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 OR2T6Q8NHC8 308 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RPLP0P6Q8NHW5 317 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TBCKQ8TEA7 893 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 APOBEC4Q8WW27 367 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 CAPSLQ8WWF8 208 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ING5Q8WYH8 240 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ISOC2Q96AB3 205 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 FAM122AQ96E09 287 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 C18orf12Q96KH6 178 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 C9orf72Q96LT7 481 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RNF2Q99496 336 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 CTRCQ99895 268 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 NIPSNAP3BQ9BS92 247 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 RAB34Q9BZG1 259 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 API5Q9BZZ5 524 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 PIGUQ9H490 435 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 TUBB1Q9H4B7 451 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 Q9HAA7 133 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 VCX3AQ9NNX9 186 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 OR2S2Q9NQN1 319 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 SAMSN1Q9NSI8 373 aaKnown RBP3.9□□□□□ -1.79
CHD9-220ENST00000569794 TMCO1Q9UM00 188 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 PPP2R2CQ9Y2T4 447 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 GMPPBQ9Y5P6 360 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 ATP10AO60312 1499 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 AGRNO00468 2067 aa3.9□□□□□ -1.79
CHD9-220ENST00000569794 A0A0A6YYD4 124 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 TCRBV9S1A1TA0A576 114 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 A8MU10 97 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 E7EWF7 191 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 SMLR1H3BR10 107 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.89□□□□□ -1.79
CHD9-220ENST00000569794 GOSR2O14653 212 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ITGB1BP1O14713 200 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 TFECO14948 347 aaPredicted RBP3.89□□□□□ -1.79
CHD9-220ENST00000569794 ZBTB5O15062 677 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 TM9SF1O15321 606 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 XRCC2O43543 280 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 NOL4O94818 638 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 IGHG3P01860 377 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ALDOBP05062 364 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ZNF853P0CG23 659 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 PNMA6AP0CW24 399 aaPredicted RBP3.89□□□□□ -1.79
CHD9-220ENST00000569794 SLC2A2P11168 524 aaPredicted RBP3.89□□□□□ -1.79
CHD9-220ENST00000569794 CALML3P27482 149 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 PSMB6P28072 239 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 EVI2BP34910 448 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 SAA4P35542 130 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 PCK1P35558 622 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 MAP3K8P41279 467 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 GPR1P46091 355 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 RGRP47804 291 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 OR3A2P47893 321 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 POU3F4P49335 361 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 HSPA2P54652 639 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 UCNP55089 124 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 OR2B6P58173 313 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 UBE2MP61081 183 aaKnown RBP3.89□□□□□ -1.79
CHD9-220ENST00000569794 TSPAN5P62079 268 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ZNF33AQ06730 810 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD9-220ENST00000569794 RIGQ13278 110 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 GPR17Q13304 367 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 C1orf220Q5T0J3 134 aa3.89□□□□□ -1.79
CHD9-220ENST00000569794 ZNF691Q5VV52 312 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms