RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 WNT1P04628 370 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ITPKBP27987 946 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ATP12AP54707 1039 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CARD18P57730 90 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 UBXN2BQ14CS0 331 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 C1orf189Q5VU69 101 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 FAM205BPQ63HN1 556 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 LEG1Q6P5S2 330 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ELOA3Q8NG57 546 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF671Q8TAW3 534 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 IFI44Q8TCB0 444 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 SLC7A6Q92536 515 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 TMEM246Q9BRR3 403 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 THAP7Q9BT49 309 aaPredicted RBP8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 LMAN1LQ9HAT1 526 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 GALNT9Q9HCQ5 603 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 COPS3Q9UNS2 423 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 OR6C68A6NDL8 312 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SERINC4A6NH21 518 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 TVP23AA6NH52 213 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 HMX3A6NHT5 357 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SHISA7A6NL88 538 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 PRAMEF2O60811 474 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CPNE3O75131 537 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 GDI2P50395 445 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CLDN12P56749 244 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SNRPD2P62316 118 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 COTL1Q14019 142 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 MANEAQ5SRI9 462 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 HBMQ6B0K9 141 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 RPL13AP3Q6NVV1 102 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 PRSS45Q7RTY3 260 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF550Q7Z398 422 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SERPINA12Q8IW75 414 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 FAM181AQ8N9Y4 354 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ZSCAN1Q8NBB4 408 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CEP76Q8TAP6 659 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ABHD1Q96SE0 405 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 TMEM43Q9BTV4 400 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ABCG5Q9H222 651 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 RBFOX1Q9NWB1 397 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 FAM47E-STBD1D6RA91 191 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 FMO6PO60774 539 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 GPANK1O95872 356 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 TFPIP10646 304 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 RAB3BP20337 219 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CD1CP29017 333 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SOX2P48431 317 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 MTNR1BP49286 362 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ARL4DP49703 201 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 NLRC3Q7RTR2 1065 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 SLC35F2Q8IXU6 374 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 RDH10Q8IZV5 341 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CARFQ8N187 725 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 PELI1Q96FA3 418 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 AHCYL2Q96HN2 611 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CNN2Q99439 309 aaKnown RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ING1Q9UK53 422 aaPredicted RBP8.01□□□□□ -1.13
LINC00558-201ENST00000569422 ASXL3Q9C0F0 2248 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 CABIN1Q9Y6J0 2220 aa8.01□□□□□ -1.13
LINC00558-201ENST00000569422 A0A1B0GTH9 108 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 C11orf98E9PRG8 122 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PLPP2O43688 288 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FZD7O75084 574 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PLGP00747 810 aaPredicted RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 GRK6P43250 576 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 GPR3P46089 330 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 CSNK1EP49674 416 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 GBX2P52951 348 aaPredicted RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 ZP2Q05996 745 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ACSM1Q08AH1 577 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FHL1Q13642 323 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FGFBP1Q14512 234 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PRTGQ2VWP7 1150 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 VWA2Q5GFL6 755 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 HES5Q5TA89 166 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 APOOLQ6UXV4 268 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 RAB11FIP2Q7L804 512 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 GPALPP1Q8IXQ4 340 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 HSD17B8Q92506 261 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PHF21AQ96BD5 680 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF524Q96C55 264 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 PGLYRP3Q96LB9 341 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 LMF2Q9BU23 707 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 G6PC3Q9BUM1 346 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 NXF5Q9H1B4 397 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 MOV10Q9HCE1 1003 aaKnown RBP8□□□□□ -1.13
LINC00558-201ENST00000569422 MCUBQ9NWR8 336 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 UCKL1Q9NWZ5 548 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 CBY1Q9Y3M2 126 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 ATG2AQ2TAZ0 1938 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 INMT-MINDY4F8WBC2 141 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 TXNL1O43396 289 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 SLC19A2O60779 497 aa8□□□□□ -1.13
LINC00558-201ENST00000569422 FCER2P06734 321 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms