RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 HACD4Q5VWC8 232 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 IQCHQ86VS3 1027 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 APCDD1Q8J025 514 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 OR5T1Q8NG75 326 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 OR1J4Q8NGS1 313 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 ZNF671Q8TAW3 534 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CAPNS2Q96L46 248 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TEAD3Q99594 435 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 NRIP2Q9BQI9 281 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 BOCQ9BWV1 1114 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 GPN1Q9HCN4 374 aaPredicted RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 IL20RAQ9UHF4 553 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 YIPF1Q9Y548 306 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 PRSS21Q9Y6M0 314 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 A0A1W2PPC1 479 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 OR2M5A3KFT3 312 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TRAPPC13A5PLN9 417 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CD8B2A6NJW9 211 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 F5H5P2 479 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 H7C4K7 107 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TP53I11O14683 189 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 EMC8O43402 210 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CD8BP10966 210 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 BCKDHAP12694 445 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 S100A3P33764 101 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 TTPAP49638 278 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CCR4P51679 360 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CCL23P55773 120 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 IRF8Q02556 426 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 GTF2H2Q13888 395 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 C6orf136Q5SQH8 315 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 C10orf91Q5T1B1 145 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 GTF2H2CQ6P1K8 395 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 PEG10Q86TG7 708 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 ETFBKMTQ8IXQ9 262 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 IP6K3Q96PC2 410 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 URM1Q9BTM9 101 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 TM6SF2Q9BZW4 377 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 BHLHE41Q9C0J9 482 aaPredicted RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 IPPKQ9H8X2 491 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 CERS4Q9HA82 394 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 HMX1Q9NP08 348 aaPredicted RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 ELOVL2Q9NXB9 296 aa9.99□□□□□ -0.81
CLK3-226ENST00000569406 FCF1Q9Y324 198 aaKnown RBP9.99□□□□□ -0.81
CLK3-226ENST00000569406 UBE2QL1A1L167 161 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 ZNF587BE7ETH6 402 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 F5H0A9 414 aaPredicted RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 SERPIND1P05546 499 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SFTPBP07988 381 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 ETFAP13804 333 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 CD82P27701 267 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 MC4RP32245 332 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 RAG2P55895 527 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 ERVPABLB-1P60509 514 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 PTGES3Q15185 160 aaKnown RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 PLK5Q496M5 336 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 LRRC37A5PQ49AS3 106 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SPANXN4Q5MJ08 99 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 UNQ6126/PRO20091Q6UXV3 157 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 OR9Q2Q8NGE9 314 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 PACRGQ96M98 296 aaPredicted RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 POTEKPQ9BYX7 375 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 CYSLTR2Q9NS75 346 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 TMEM184CQ9NVA4 438 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SLC25A37Q9NYZ2 338 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 RCC2Q9P258 522 aaKnown RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 PRAF2O60831 178 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 NFATC1O95644 943 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 LPOP22079 712 aaPredicted RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 WNT5AP41221 380 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 CXADRP78310 365 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 FBXW9Q5XUX1 488 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 FAHD2BQ6P2I3 314 aaPredicted RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 PRSS45Q7RTY3 260 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SPICQ8N5J4 248 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 AUTS2Q8WXX7 1259 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 FAHD2AQ96GK7 314 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SF3B5Q9BWJ5 86 aaKnown RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 GSX1Q9H4S2 264 aaPredicted RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 MAN2C1Q9NTJ4 1040 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 GTF2A1LQ9UNN4 478 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 TAPBPO15533 448 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 OPN1LWP04000 364 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 RHOCP08134 193 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SOD3P08294 240 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 PSMB1P20618 241 aaKnown RBP9.98□□□□□ -0.81
CLK3-226ENST00000569406 NME2P22392 152 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 KIR3DL1P43629 444 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 ART1P52961 327 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 DLX5P56178 289 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 REEP5Q00765 189 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 KIAA0040Q15053 153 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 ZNF674Q2M3X9 581 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 NKAIN2Q5VXU1 208 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 SEMA6DQ8NFY4 1073 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 OR5M3Q8NGP4 307 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 OR8D1Q8WZ84 308 aa9.98□□□□□ -0.81
CLK3-226ENST00000569406 PNPLA2Q96AD5 504 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms