RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 KRT75O95678 551 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 MBD3O95983 291 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PDHBP11177 359 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ANXA8P13928 327 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 GFAPP14136 432 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CPN1P15169 458 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CD1EP15812 388 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PRKACAP17612 351 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 RAB4AP20338 218 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 NMT1P30419 496 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PHBP35232 272 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CCT3P49368 545 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TUFMP49411 452 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 P2RY4P51582 365 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ATXN3P54252 364 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 HADHBP55084 474 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 RPL8P62917 257 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 IL1RL1Q01638 556 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OTUD4Q01804 1114 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 GBE1Q04446 702 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF154Q13106 437 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 DMC1Q14565 340 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 KCNJ11Q14654 390 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 BCL2A1Q16548 175 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 DPYSL2Q16555 572 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 DEFB115Q30KQ5 88 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PAGE2BQ5JRK9 111 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 LDLRAP1Q5SW96 308 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 C12orf60Q5U649 245 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ANXA8L1Q5VT79 327 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 SLX4IPQ5VYV7 408 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TPGS2Q68CL5 300 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PTRHD1Q6GMV3 140 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 BLOC1S2Q6QNY1 142 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TMEM184AQ6ZMB5 413 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PRR22Q8IZ63 422 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 KDM8Q8N371 416 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM133AQ8N9E0 248 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 STKLD1Q8NE28 680 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 IPMKQ8NFU5 416 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OR56B2PQ8NGI1 322 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OR9A4Q8NGU2 314 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 LILRB4Q8NHJ6 448 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CLHC1Q8NHS4 586 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ANGPTL6Q8NI99 470 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 AGR3Q8TD06 166 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 HAUS1Q96CS2 278 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TMEM80Q96HE8 168 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 RPRD1AQ96P16 312 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 OLFM3Q96PB7 478 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TESK2Q96S53 571 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TXN2Q99757 166 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 KRT23Q9C075 422 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 HSD3B7Q9H2F3 369 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TRIM45Q9H8W5 580 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ROPN1Q9HAT0 212 aaPredicted RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 CRLF2Q9HC73 371 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 TM9SF3Q9HD45 589 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 C12orf4Q9NQ89 552 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 PNO1Q9NRX1 252 aaKnown RBP2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 RMND1Q9NWS8 449 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ANKMY1Q9P2S6 941 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 ABCC4O15439 1325 aa2.63□□□□□ -1.99
HERPUD1-212ENST00000567944 UNC80Q8N2C7 3258 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 LAMB2P55268 1798 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ANKRD36CQ5JPF3 1778 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SCN9AQ15858 1988 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 C15orf38-AP3S2A0A0A6YYH1 394 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 EFCAB10A6NFE3 127 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SAGE2PA6NJ88 616 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 H0Y8G0 127 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 LGALS8O00214 317 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CASC3O15234 703 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CHMP2AO43633 222 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 PRPSAP2O60256 369 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SEC22BO75396 215 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 PTBP3O95758 552 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ASGR1P07306 291 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CCDC192P0DO97 292 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SYT1P21579 422 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 DNAJB1P25685 340 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ADSSP30520 456 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 RRM2P31350 389 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 BMI1P35226 326 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 DRD3P35462 400 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 HSPA9P38646 679 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 DIO3P55073 304 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 GMFBP60983 142 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 GNB2P62879 340 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 SPP2Q13103 211 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 STX3Q13277 289 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 RIPK1Q13546 671 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 EXOSC2Q13868 293 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 KARSQ15046 597 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ZMYND11Q15326 602 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CEBPEQ15744 281 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 UAP1Q16222 522 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 KLHL38Q2WGJ6 581 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 ADPRMQ3LIE5 342 aa2.62□□□□□ -1.99
HERPUD1-212ENST00000567944 CST9Q5W186 159 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms