RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 C9orf135Q5VTT2 229 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 FAM91A1Q658Y4 838 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ULK3Q6PHR2 472 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 KLHL24Q6TFL4 600 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 NET1Q7Z628 596 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 DHDDSQ86SQ9 333 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 DTX2Q86UW9 622 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 RANBP3LQ86VV4 465 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 ARMC8Q8IUR7 673 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SLC30A8Q8IWU4 369 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 C10orf111Q8N326 155 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 CIARTQ8N365 385 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 DPP10Q8N608 796 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ZIC4Q8N9L1 334 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 C11orf65Q8NCR3 313 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 HIPK4Q8NE63 616 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 OR52E4Q8NGH9 312 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 NEUROG1Q92886 237 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SLC38A4Q969I6 547 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 GTPBP3Q969Y2 492 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 KTI12Q96EK9 354 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 SLC47A1Q96FL8 570 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 THOC1Q96FV9 657 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 ANKRD27Q96NW4 1050 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ZNF385AQ96PM9 386 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 ZNF317Q96PQ6 595 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 SMR3AQ99954 134 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 TRAF4Q9BUZ4 470 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 PTDSS2Q9BVG9 487 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 RSPO3Q9BXY4 272 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 LINC00470Q9BZP3 86 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 IKZF5Q9H5V7 419 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 NPHS2Q9NP85 383 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SLC17A5Q9NRA2 495 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 CISD1Q9NZ45 108 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 SELENONQ9NZV5 590 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 TESQ9UGI8 421 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 SLC13A4Q9UKG4 626 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 POU2F3Q9UKI9 436 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ANGPT4Q9Y264 503 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 B3GALT5Q9Y2C3 310 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 NDUFAF1Q9Y375 327 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 NSD1Q96L73 2696 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 CADP27708 2225 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SVEP1Q4LDE5 3571 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ANK3Q12955 4377 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 MTORP42345 2549 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TRAV36DV7A0A075B6V5 113 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 A0A087WUJ7 227 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 A0A0B4J2E0 115 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 LOC102725191A0A1B0GVB3 256 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 A0A1B0GX12 115 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 A0A1W2PR80 420 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TRIM64A6NGJ6 449 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 RPL36A-HNRNPH2H7BZ11 118 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 M0R082 166 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 M0R1B8 84 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SMAD7O15105 426 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 AKAP8O43823 692 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 FMO6PO60774 539 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SASH3O75995 380 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 MFN2O95140 757 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 LGI1O95970 557 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 NPPAP01160 153 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CD8AP01732 235 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 C8BP07358 591 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TROVE2P10155 538 aaKnown RBP eCLIP4.19□□□□□ -1.74
CLK3-219ENST00000567805 ZNF43P17038 809 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CDH2P19022 906 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 AQP1P29972 269 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TTKP33981 857 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CDKN1AP38936 164 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SELENOPP49908 381 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ZNF83P51522 516 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SH3BGRP55822 239 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 PCBP3P57721 371 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 MTPNP58546 118 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 PRPS1P60891 318 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SLC25A3Q00325 362 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 LTBQ06643 244 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 DMTNQ08495 405 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SPOCK1Q08629 439 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 TNK1Q13470 666 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 MFSD13AQ14CX5 517 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 NRF1Q16656 503 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 CLEC12BQ2HXU8 276 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 C3orf36Q3SXR2 165 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 INTS11Q5TA45 600 aaKnown RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 AGAP6Q5VW22 663 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 C11orf71Q6IPW1 123 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 HMBOX1Q6NT76 420 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 NIPAL3Q6P499 406 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 ZNF613Q6PF04 617 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 SLC22A25Q6T423 547 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 H1FNTQ75WM6 255 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 COMTD1Q86VU5 262 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 LSRQ86X29 649 aaPredicted RBP4.19□□□□□ -1.74
CLK3-219ENST00000567805 PTOV1Q86YD1 416 aa4.19□□□□□ -1.74
CLK3-219ENST00000567805 EPHX4Q8IUS5 362 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms