RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 GXYLT2A0PJZ3 443 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 NPIPA7E9PJI5 369 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 PRAMEF2O60811 474 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 FGF19O95750 216 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 RLN2P04090 185 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 H2AFB1P0C5Y9 115 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 UBBP0CG47 229 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 UBCP0CG48 685 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 NPIPA8P0DM63 369 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 NANOS3P60323 173 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 RPS27AP62979 156 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 UBA52P62987 128 aaKnown RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 PON3Q15166 354 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 SLC35D3Q5M8T2 416 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF684Q5T5D7 378 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 STAC2Q6ZMT1 411 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 C17orf107Q6ZR85 190 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 C12orf40Q86WS4 652 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 MUC20Q8N307 709 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 OR51L1Q8NGJ5 315 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 OR4C16Q8NGL9 310 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 OR6N1Q8NGY5 312 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 ZNRF4Q8WWF5 429 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 NXPE3Q969Y0 559 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 MFFQ9GZY8 342 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 BARX1Q9HBU1 254 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-215ENST00000566843 ZNF304Q9HCX3 659 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 DUSP22Q9NRW4 184 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 RASL12Q9NYN1 266 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 KCNK7Q9Y2U2 307 aa14.36□□□□□ -0.11
COMMD4-215ENST00000566843 RFPL4AA6NLU0 287 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 RFPL4AL1F8VTS6 287 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 EIF4E2O60573 245 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 RBBP9O75884 186 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 NGFRP08138 427 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 CSRP1P21291 193 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 MAGEB1P43366 347 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 SCAND1P57086 179 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 OC90Q02509 493 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 ELAVL3Q14576 367 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 NDUFAF6Q330K2 333 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 PDSS1Q5T2R2 415 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 USP53Q70EK8 1073 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 OR52E1Q8NGJ3 308 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 LRRC46Q96FV0 321 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 HPF1Q9NWY4 346 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 TAS2R8Q9NYW2 309 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 CYB5R1Q9UHQ9 305 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 SNRNP200O75643 2136 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 MUC22E2RYF6 1773 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 TMEM272A0A1B0GTI8 110 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 A0A1B0GWA3 101 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 FAM74A7A6NL05 159 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 XRCC3O43542 346 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 KDM4BO94953 1096 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 ZFPL1O95159 310 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 NDUFB2O95178 105 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 MGMTP16455 207 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 ADRA2CP18825 462 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 FAM74A3Q4VXF1 159 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 FNDC3BQ53EP0 1204 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 TRMT12Q53H54 448 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 CLVS2Q5SYC1 327 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 LRRTM1Q86UE6 522 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 MYADMQ96S97 322 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 STACQ99469 402 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 NMNAT2Q9BZQ4 307 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 PURGQ9UJV8 347 aaKnown RBP14.35□□□□□ -0.11
COMMD4-215ENST00000566843 ENTPD2Q9Y5L3 495 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 IER3IP1Q9Y5U9 82 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 PTPRSQ13332 1948 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 NUMA1Q14980 2115 aa14.35□□□□□ -0.11
COMMD4-215ENST00000566843 IDSB3KWA1 339 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 GPR89AB7ZAQ6 455 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 SPDEFO95238 335 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 CSF1P09603 554 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 GPR89BP0CG08 455 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 ITPKBP27987 946 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 RPE65Q16518 533 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PCGF3Q3KNV8 242 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PSRC1Q6PGN9 363 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-215ENST00000566843 MOB3CQ70IA8 216 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PAQR7Q86WK9 346 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 NPEPL1Q8NDH3 523 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 ST8SIA2Q92186 375 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 TEX101Q9BY14 249 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PBX4Q9BYU1 374 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 SLITRK2Q9H156 845 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 ALX4Q9H161 411 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-215ENST00000566843 IL21RQ9HBE5 538 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 SPHK1Q9NYA1 384 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 PLCL2Q9UPR0 1127 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 SLC6A5Q9Y345 797 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 TRAV14DV4A0A0A6YYC5 116 aa14.34□□□□□ -0.11
COMMD4-215ENST00000566843 SIGLEC6O43699 453 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms