RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 CHD3Q12873 2000 aaKnown RBP11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 MRASO14807 208 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 AIM2O14862 343 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 CLOCKO15516 846 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 DANCRP0C864 163 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 ZNF43P17038 809 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 PTAFRP25105 342 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 CDH12P55289 794 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 VEZF1Q14119 521 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 KLHL17Q6TDP4 642 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 PCYOX1LQ8NBM8 494 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 ANKK1Q8NFD2 765 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 C10orf82Q8WW14 230 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 SLC41A3Q96GZ6 507 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 MCHR1Q99705 422 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 ECSITQ9BQ95 431 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 LINC00470Q9BZP3 86 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 GRIP2Q9C0E4 1043 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 PCDHAC1Q9H158 963 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 CXorf56Q9H5V9 222 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 SLC17A5Q9NRA2 495 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 GID8Q9NWU2 228 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 B3GAT1Q9P2W7 334 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 MGAT4BQ9UQ53 548 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 RCE1Q9Y256 329 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 AMDHD2Q9Y303 409 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
LPCAT4-206ENST00000566581 YLPM1P49750 1951 aaKnown RBP11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 LOC100653049A0A140TA62 436 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SHISA9B4DS77 424 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 M0R082 166 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 OVOL3O00110 214 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 KRT34O76011 436 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 ZNF432O94892 652 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 OPN1SWP03999 348 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 CD247P20963 164 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 PAX7P23759 505 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 GRPRP30550 384 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SELENOPP49908 381 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 CRYBA2P53672 197 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 REP15Q6BDI9 236 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 ERICH5Q6P6B1 374 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SNX32Q86XE0 403 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 ZNF417Q8TAU3 575 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SLC26A7Q8TE54 656 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 SMAP2Q8WU79 429 aaPredicted RBP11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 TAMM41Q96BW9 452 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 ZNF583Q96ND8 569 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 ZNF587Q96SQ5 575 aaPredicted RBP11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 OBP2BQ9NPH6 170 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 MAGED1Q9Y5V3 778 aaPredicted RBP11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 CAPN7Q9Y6W3 813 aa11.09□□□□□ -0.63
LPCAT4-206ENST00000566581 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 ZNF587BE7ETH6 402 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 MS4A18H0YCH9 400 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 RPL36A-HNRNPH2H7BZ11 118 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 M0R3H8 397 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 ABCD4O14678 606 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 CHP2O43745 196 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 KRT33AO76009 404 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 WNT11O96014 354 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 MT-ATP6P00846 226 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 BGLAPP02818 100 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 CD40P25942 277 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 PTH2RP49190 550 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 PRPS1P60891 318 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 LTBQ06643 244 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 SF3A3Q12874 501 aaKnown RBP eCLIP11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 NPTX1Q15818 432 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 PGGHGQ32M88 737 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 MS4A18Q3C1V0 323 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 ENTPD8Q5MY95 495 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 Q5PR19 223 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 C9orf135Q5VTT2 229 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 NIPAL3Q6P499 406 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 KDM8Q8N371 416 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 KBTBD8Q8NFY9 601 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 RP9Q8TA86 221 aaKnown RBP11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 ADAMTS16Q8TE57 1224 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 MRPL39Q9NYK5 338 aaKnown RBP11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 CISD1Q9NZ45 108 aaKnown RBP11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 SEC14L4Q9UDX3 406 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
LPCAT4-206ENST00000566581 TRAPPC13A5PLN9 417 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 TRAF3IP2O43734 574 aaPredicted RBP11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 CCDC22O60826 627 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 LYPD3O95274 346 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 IFNA14P01570 189 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 SOD3P08294 240 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 ZNF83P51522 516 aa11.07□□□□□ -0.64
LPCAT4-206ENST00000566581 SH3BGRP55822 239 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms