RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LSMEM1Q8N8F7 131 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 BCL2L2Q92843 193 aaPredicted RBP15.98■□□□□ 0.15
USB1-213ENST00000566292 TAAR8Q969N4 342 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 ATP6V1G3Q96LB4 118 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 C12orf10Q9HB07 376 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 OBP2BQ9NPH6 170 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 RPS6KB2Q9UBS0 482 aa15.98■□□□□ 0.15
USB1-213ENST00000566292 CUBNO60494 3623 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 COL6A5A8TX70 2615 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 IGKV1D-42A0A075B6H8 117 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 OR6C65A6NJZ3 312 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 GPRIN2O60269 458 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 ZNF432O94892 652 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 TP53P04637 393 aaPredicted RBP15.97■□□□□ 0.15
USB1-213ENST00000566292 TUBA1BP68363 451 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 TUBA4AP68366 448 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 MST1LQ2TV78 715 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 AGKQ53H12 422 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 CLEC2AQ6UVW9 174 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 TUBA1AQ71U36 451 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 SLC38A2Q96QD8 506 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 LINC00470Q9BZP3 86 aa15.97■□□□□ 0.15
USB1-213ENST00000566292 FBN1P35555 2871 aaKnown RBP15.97■□□□□ 0.15
USB1-213ENST00000566292 A0A096LPE4 126 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ARPC4-TTLL3A0A0A6YYG9 625 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 A0A1W2PPZ6 126 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 M0R082 166 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 TLX2O43763 284 aaPredicted RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 ZNF43P17038 809 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 GPX2P18283 190 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 PPIBP23284 216 aaKnown RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 GTF2E2P29084 291 aaKnown RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 ATP4BP51164 291 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ROR2Q01974 943 aaKnown RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 SCARB2Q14108 478 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ADRM1Q16186 407 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 SWI5Q1ZZU3 235 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ALG10BQ5I7T1 473 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 FAM69AQ5T7M9 428 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ZNF417Q8TAU3 575 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 MAGEE2Q8TD90 523 aaPredicted RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 SLC38A4Q969I6 547 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 OXGR1Q96P68 337 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 ZNF587Q96SQ5 575 aaPredicted RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 WFDC6Q9BQY6 131 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 TMEM38AQ9H6F2 299 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 YAE1D1Q9NRH1 226 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 CRNNQ9UBG3 495 aaPredicted RBP15.96■□□□□ 0.15
USB1-213ENST00000566292 RCE1Q9Y256 329 aa15.96■□□□□ 0.15
USB1-213ENST00000566292 RPL36A-HNRNPH2H7BZ11 118 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 AIM2O14862 343 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 OR2T1O43869 369 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 LY6HO94772 140 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 GRPRP30550 384 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 DSCR9P59020 149 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 UBE2NP61088 152 aaKnown RBP15.95■□□□□ 0.14
USB1-213ENST00000566292 CHRNB3Q05901 458 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 SQLEQ14534 574 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 HMBOX1Q6NT76 420 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 ANKRD16Q6P6B7 361 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 C5orf46Q6UWT4 87 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 DLEU7Q6UYE1 221 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 KRT73Q86Y46 540 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 DNAJA4Q8WW22 397 aaPredicted RBP15.95■□□□□ 0.14
USB1-213ENST00000566292 NANOS1Q8WY41 292 aaKnown RBP15.95■□□□□ 0.14
USB1-213ENST00000566292 FBXO17Q96EF6 278 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 CPPED1Q9BRF8 314 aaPredicted RBP15.95■□□□□ 0.14
USB1-213ENST00000566292 SPATA5L1Q9BVQ7 753 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 SEC61A2Q9H9S3 476 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 KLHL14Q9P2G3 628 aa15.95■□□□□ 0.14
USB1-213ENST00000566292 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.95■□□□□ 0.14
USB1-213ENST00000566292 TRAV36DV7A0A075B6V5 113 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 TPST2O60704 377 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 CECR9P0C854 216 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 CBLP22681 906 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 AQP1P29972 269 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 EFNA4P52798 201 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 ARF1P84077 181 aaKnown RBP15.94■□□□□ 0.14
USB1-213ENST00000566292 TMEM249Q2WGJ8 235 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 FAM91A1Q658Y4 838 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 ULK3Q6PHR2 472 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 C10orf105Q8TEF2 133 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 ZNF837Q96EG3 531 aaPredicted RBP15.94■□□□□ 0.14
USB1-213ENST00000566292 ZNF317Q96PQ6 595 aaPredicted RBP15.94■□□□□ 0.14
USB1-213ENST00000566292 TNFRSF13CQ96RJ3 184 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 KATNB1Q9BVA0 655 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 GPR35Q9HC97 309 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 TESQ9UGI8 421 aaKnown RBP15.94■□□□□ 0.14
USB1-213ENST00000566292 PMF1-BGLAPU3KQ54 211 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 MXRA5Q9NR99 2828 aa15.94■□□□□ 0.14
USB1-213ENST00000566292 A0A0B4J2E0 115 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 A0A1B0GX12 115 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 EVPLLA8MZ36 301 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 TRAF3IP2O43734 574 aaPredicted RBP15.93■□□□□ 0.14
USB1-213ENST00000566292 SLC43A1O75387 559 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 HPRP00739 348 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 IGLV1-44P01699 117 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 BMP4P12644 408 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 PAX7P23759 505 aa15.93■□□□□ 0.14
USB1-213ENST00000566292 SLC6A2P23975 617 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms