RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 DOLPP1Q86YN1 238 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 DEPDC4Q8N2C3 294 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 OR6S1Q8NH40 331 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 GIPC3Q8TF64 312 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 HRASLS5Q96KN8 279 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 HS6ST2Q96MM7 605 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 DACH2Q96NX9 599 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 FUZQ9BT04 418 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 FNDC11Q9BVV2 318 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SLC19A3Q9BZV2 496 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 ANKRD19PQ9H560 264 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 NMNAT1Q9HAN9 279 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 KRT84Q9NSB2 600 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 TNFRSF10DQ9UBN6 386 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 WARS2Q9UGM6 360 aaKnown RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SLC7A7Q9UM01 511 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
SF3B3-206ENST00000565990 FAM32AQ9Y421 112 aaKnown RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 SPIN1Q9Y657 262 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-206ENST00000565990 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 SLC19A2O60779 497 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 FZD7O75084 574 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 PMS2P2O95744 297 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 OPN1LWP04000 364 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 STSP08842 583 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 GABRA1P14867 456 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 POU3F2P20265 443 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 IFNA8P32881 189 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 PTGER4P35408 488 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 RBM34P42696 430 aaKnown RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 LIMS1P48059 325 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 DAPP51397 102 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 GP2P55259 537 aaKnown RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 TRAM2Q15035 370 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 SF3B4Q15427 424 aaKnown RBP eCLIP11.32□□□□□ -0.64e-11■■■■□ 26.7
SF3B3-206ENST00000565990 IGFBP7Q16270 282 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 CTF1Q16619 201 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 C5orf46Q6UWT4 87 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 DCDC5Q6ZRR9 648 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 TMPPEQ6ZT21 453 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 TMEM179BQ7Z7N9 219 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 EGFL6Q8IUX8 553 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 NKAIN4Q8IVV8 208 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 BPIFB6Q8NFQ5 453 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 OSTF1Q92882 214 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 DDIT4LQ96D03 193 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ARL5BQ96KC2 179 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 KLHL15Q96M94 604 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 NAA50Q9GZZ1 169 aaKnown RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 RACGAP1Q9H0H5 632 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 CALHM2Q9HA72 323 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 PAQR5Q9NXK6 330 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 KIF17Q9P2E2 1029 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ITGB1BP2Q9UKP3 347 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 POFUT2Q9Y2G5 429 aa11.32□□□□□ -0.6
SF3B3-206ENST00000565990 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
SF3B3-206ENST00000565990 ZC3H12DA2A288 527 aaKnown RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 FTCDNL1E5RQL4 147 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 H0YC42 278 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 PRRG2O14669 202 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MPZL2O60487 215 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 WDR1O75083 606 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 DIRAS1O95057 198 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 H1F0P07305 194 aaKnown RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 OCM2P0CE71 109 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 OCMP0CE72 109 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 AGFG1P52594 562 aaKnown RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 IST1P53990 364 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 CARD18P57730 90 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 SMIM11AP58511 58 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 RAC3P60763 192 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 H3F3AP84243 136 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 EMX1Q04741 257 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 NPRL3Q12980 569 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MYBPHQ13203 477 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
SF3B3-206ENST00000565990 PDSS1Q5T2R2 415 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 C1orf140Q5VVS0 124 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 POMZP3Q6PJE2 187 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 PRICKLE2Q7Z3G6 844 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 P2RY8Q86VZ1 359 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MED12LQ86YW9 2145 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 ATP6V1C2Q8NEY4 427 aa11.31□□□□□ -0.6
SF3B3-206ENST00000565990 MYDGFQ969H8 173 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms