RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 A0A087WUJ7 227 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 ZNF587BE7ETH6 402 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 OVOL3O00110 214 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 FXYD1O00168 92 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 AIM2O14862 343 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 OR2T1O43869 369 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 UPK3AO75631 287 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 LGI1O95970 557 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 PCGF2P35227 344 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 CDH12P55289 794 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 CLDN17P56750 224 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 NPTX1Q15818 432 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 NRF1Q16656 503 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 DUSP7Q16829 419 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 RABL3Q5HYI8 236 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 C5orf46Q6UWT4 87 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 TAMM41Q96BW9 452 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 MCHR1Q99705 422 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 AMDHD2Q9Y303 409 aa17.5■□□□□ 0.39
SHCBP1-203ENST00000564272 SMAD7O15105 426 aaKnown RBP17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 ZNF43P17038 809 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 PTAFRP25105 342 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 GZMMP51124 257 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 IL1RL1Q01638 556 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 KLF10Q13118 480 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 REP15Q6BDI9 236 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 NANOGP8Q6NSW7 305 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC22A25Q6T423 547 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 B3GLCTQ6Y288 498 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 ABHD12BQ7Z5M8 362 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 OR6T1Q8NGN1 323 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 GTPBP3Q969Y2 492 aaKnown RBP17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 OXGR1Q96P68 337 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 TRAF4Q9BUZ4 470 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 EVA1AQ9H8M9 152 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 NANOGQ9H9S0 305 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 SAR1AQ9NR31 198 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 POU2F3Q9UKI9 436 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 MGAT4BQ9UQ53 548 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 PLCE1Q9P212 2302 aa17.49■□□□□ 0.39
SHCBP1-203ENST00000564272 CPSF4LA6NMK7 179 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 E7EQL1 145 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 MRASO14807 208 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 CD8AP01732 235 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 BGLAPP02818 100 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 CD247P20963 164 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 LTBQ06643 244 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 C1DQ13901 141 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 CYLC2Q14093 348 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 VMACQ2NL98 169 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 KLHL24Q6TFL4 600 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 H1FNTQ75WM6 255 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 PATL1Q86TB9 770 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 SNX32Q86XE0 403 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 RBM45Q8IUH3 476 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC30A8Q8IWU4 369 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 OR4D11Q8NGI4 311 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 OR1K1Q8NGR3 316 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 VANGL1Q8TAA9 524 aaPredicted RBP17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 LRRC58Q96CX6 371 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 RADILQ96JH8 1075 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 BDH2Q9BUT1 245 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 RCE1Q9Y256 329 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 B3GALT5Q9Y2C3 310 aa17.48■□□□□ 0.39
SHCBP1-203ENST00000564272 OR6C65A6NJZ3 312 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 LRRN3E7EW58 273 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 TRAF3IP2O43734 574 aaPredicted RBP17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 FMO6PO60774 539 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 ZNF432O94892 652 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 HPRP00739 348 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 CRYBA2P53672 197 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 PRPS1P60891 318 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 TBRG1Q3YBR2 411 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 MMEL1Q495T6 779 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 SWT1Q5T5J6 900 aaKnown RBP17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 CLEC9AQ6UXN8 241 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 DTX2Q86UW9 622 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 ADPRHL1Q8NDY3 354 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 MOGAT1Q96PD6 335 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 EPYCQ99645 322 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 LINC00470Q9BZP3 86 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 ALG2Q9H553 416 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 FAIMQ9NVQ4 179 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 USP22Q9UPT9 525 aa17.47■□□□□ 0.39
SHCBP1-203ENST00000564272 BBIP1A8MTZ0 92 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 SLC43A1O75387 559 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 WNT11O96014 354 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 C8BP07358 591 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 NQO1P15559 274 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 ROR2Q01974 943 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 HSP90B2PQ58FF3 399 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 COQ5Q5HYK3 327 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 ENTPD8Q5MY95 495 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 INTS11Q5TA45 600 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 HMBOX1Q6NT76 420 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 ZNF613Q6PF04 617 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 WDR88Q6ZMY6 472 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 TSPYL5Q86VY4 417 aaPredicted RBP17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 CALHM3Q86XJ0 350 aa17.46■□□□□ 0.39
SHCBP1-203ENST00000564272 C10orf53Q8N6V4 93 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms