RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 UPK3AO75631 287 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 GPX2P18283 190 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 UBE2NP61088 152 aaKnown RBP15.46■□□□□ 0.07
NME3-205ENST00000563854 NRF1Q16656 503 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 TBRG1Q3YBR2 411 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 HMBOX1Q6NT76 420 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 C6orf89Q6UWU4 347 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 LINGO2Q7L985 606 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 SMYD1Q8NB12 490 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 HIPK4Q8NE63 616 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 ZNF417Q8TAU3 575 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 DNAJA4Q8WW22 397 aaPredicted RBP15.46■□□□□ 0.07
NME3-205ENST00000563854 TAAR8Q969N4 342 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 ZNF587Q96SQ5 575 aaPredicted RBP15.46■□□□□ 0.07
NME3-205ENST00000563854 KCNS3Q9BQ31 491 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 TMEM38AQ9H6F2 299 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 TESQ9UGI8 421 aaKnown RBP15.46■□□□□ 0.07
NME3-205ENST00000563854 TRIM33Q9UPN9 1127 aa15.46■□□□□ 0.07
NME3-205ENST00000563854 FN1P02751 2386 aaKnown RBP15.46■□□□□ 0.06
NME3-205ENST00000563854 ZANQ9Y493 2812 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 IGKV1D-42A0A075B6H8 117 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 TRAV36DV7A0A075B6V5 113 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 SERPINB7O75635 380 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 OPN1SWP03999 348 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 NQO1P15559 274 aaKnown RBP15.45■□□□□ 0.06
NME3-205ENST00000563854 GRPRP30550 384 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 MTPNP58546 118 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 ROR2Q01974 943 aaKnown RBP15.45■□□□□ 0.06
NME3-205ENST00000563854 DMTNQ08495 405 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 NFYCQ13952 458 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 FAM69AQ5T7M9 428 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 C11orf71Q6IPW1 123 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 ULK3Q6PHR2 472 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 DLEU7Q6UYE1 221 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 C10orf53Q8N6V4 93 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 LSMEM1Q8N8F7 131 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 SLC47A1Q96FL8 570 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 GRIP2Q9C0E4 1043 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 C12orf10Q9HB07 376 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 TMEM27Q9HBJ8 222 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 NDUFAF1Q9Y375 327 aa15.45■□□□□ 0.06
NME3-205ENST00000563854 IGHV1-18A0A0C4DH31 117 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 A0A0G2JND7 137 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 OR6C65A6NJZ3 312 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 M0R3H8 397 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 OR2T1O43869 369 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 SLC43A1O75387 559 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 TP53P04637 393 aaPredicted RBP15.44■□□□□ 0.06
NME3-205ENST00000563854 SELPLGQ14242 412 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 RAB35Q15286 201 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 OR1Q1Q15612 314 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 ADRM1Q16186 407 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 RUNDC3AQ59EK9 446 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 CARD17Q5XLA6 110 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 ZNF544Q6NX49 715 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 C5orf46Q6UWT4 87 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 RANBP3LQ86VV4 465 aaPredicted RBP15.44■□□□□ 0.06
NME3-205ENST00000563854 GPR137CQ8N3F9 429 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 C11orf65Q8NCR3 313 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 OXGR1Q96P68 337 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 RHNO1Q9BSD3 238 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 KLHL14Q9P2G3 628 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 B3GAT1Q9P2W7 334 aa15.44■□□□□ 0.06
NME3-205ENST00000563854 EDF1O60869 148 aaKnown RBP15.43■□□□□ 0.06
NME3-205ENST00000563854 KRTAP1-1Q07627 177 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 FAM91A1Q658Y4 838 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 CLEC2AQ6UVW9 174 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 H1FNTQ75WM6 255 aaPredicted RBP15.43■□□□□ 0.06
NME3-205ENST00000563854 RETREG3Q86VR2 466 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 PTOV1Q86YD1 416 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 BCL2L2Q92843 193 aaPredicted RBP15.43■□□□□ 0.06
NME3-205ENST00000563854 FBXO17Q96EF6 278 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 SLC38A2Q96QD8 506 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 EPYCQ99645 322 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 CGREF1Q99674 301 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 WFDC6Q9BQY6 131 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 ASPNQ9BXN1 380 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 LINC00470Q9BZP3 86 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 VIPAS39Q9H9C1 493 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 OBP2BQ9NPH6 170 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 RCE1Q9Y256 329 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 GMEB1Q9Y692 573 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 TLN2Q9Y4G6 2542 aa15.43■□□□□ 0.06
NME3-205ENST00000563854 IGHV4-30-2A0A087WSY4 118 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 A0A0B4J2E0 115 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 A0A1B0GX12 115 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 AKAP8O43823 692 aaKnown RBP15.42■□□□□ 0.06
NME3-205ENST00000563854 SERPINI2O75830 405 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 SEC14L2O76054 403 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 MFN2O95140 757 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 APOBEC3AP31941 199 aaPredicted RBP15.42■□□□□ 0.06
NME3-205ENST00000563854 CAPZA2P47755 286 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 ARF1P84077 181 aaKnown RBP15.42■□□□□ 0.06
NME3-205ENST00000563854 CHRNB3Q05901 458 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 SF3A3Q12874 501 aaKnown RBP eCLIP15.42■□□□□ 0.06
NME3-205ENST00000563854 ANKRD16Q6P6B7 361 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 VHLLQ6RSH7 139 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 UEVLDQ8IX04 471 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 ZNF525Q8N782 197 aa15.42■□□□□ 0.06
NME3-205ENST00000563854 BHLHE22Q8NFJ8 381 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms