RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ARPC3O15145 178 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 EIF2S3P41091 472 aaKnown RBP19.75■□□□□ 0.75
LINC01960-201ENST00000563759 WIPI1Q5MNZ9 446 aaPredicted RBP19.75■□□□□ 0.75
LINC01960-201ENST00000563759 CPOQ8IVL8 374 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 SCAIQ8N9R8 606 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 LRRC75AQ8NAA5 344 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 FAM98AQ8NCA5 519 aaKnown RBP19.75■□□□□ 0.75
LINC01960-201ENST00000563759 DUSP21Q9H596 190 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 SSUH2Q9Y2M2 353 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 RPL36Q9Y3U8 105 aaKnown RBP19.75■□□□□ 0.75
LINC01960-201ENST00000563759 CSAG2Q9Y5P2 127 aa19.75■□□□□ 0.75
LINC01960-201ENST00000563759 ANKRD11Q6UB99 2663 aaPredicted RBP19.74■□□□□ 0.75
LINC01960-201ENST00000563759 DMXL2Q8TDJ6 3036 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 ZNF407Q9C0G0 2248 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 PRODHO43272 600 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 HIST1H1CP16403 213 aaKnown RBP19.74■□□□□ 0.75
LINC01960-201ENST00000563759 PAICSP22234 425 aaKnown RBP19.74■□□□□ 0.75
LINC01960-201ENST00000563759 B3GALT5-AS1P59052 145 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 RAC1P63000 192 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 TLE3Q04726 772 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 PLBD1Q6P4A8 553 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 LSM14AQ8ND56 463 aaKnown RBP19.74■□□□□ 0.75
LINC01960-201ENST00000563759 SDR9C7Q8NEX9 313 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 OR52E2Q8NGJ4 325 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 OR4K13Q8NH42 304 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 RFKQ969G6 155 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 RASD2Q96D21 266 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 CHST11Q9NPF2 352 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 ERVK-18Q9QC07 812 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 GRHPRQ9UBQ7 328 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 KLHL21Q9UJP4 597 aa19.74■□□□□ 0.75
LINC01960-201ENST00000563759 TEX13CA0A0J9YWL9 993 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 GJE1A6NN92 205 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 KDM4EB2RXH2 506 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PRR23D1E9PI22 279 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 SULT2B1O00204 365 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PLPP3O14495 311 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 RGS10O43665 173 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 IDH3BO43837 385 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PLGP00747 810 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PRR23D2P0DMB1 279 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 CDH11P55287 796 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 OR2B6P58173 313 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 ZNF91Q05481 1191 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PUDPQ08623 228 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 CRMP1Q14194 572 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 NXNL2Q5VZ03 156 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 H1FNTQ75WM6 255 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 GGHQ92820 318 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 MYDGFQ969H8 173 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 FAM122AQ96E09 287 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 SMAD5Q99717 465 aaKnown RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 BATF3Q9NR55 127 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 INIPQ9NRY2 104 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 H2AFY2Q9P0M6 372 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 EFCAB10A6NFE3 127 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 AKR7A3O95154 331 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 HTR1AP08908 422 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 DBTP11182 482 aaKnown RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 APEHP13798 732 aaKnown RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 SDHAP31040 664 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 MAGEA5P43359 124 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 DIO1P49895 249 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 FAM122BQ7Z309 247 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.73■□□□□ 0.75
LINC01960-201ENST00000563759 GID4Q8IVV7 300 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 CYB561A3Q8NBI2 242 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 TM9SF4Q92544 642 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 Q96M85 177 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 VCX3AQ9NNX9 186 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 IGF2RP11717 2491 aa19.73■□□□□ 0.75
LINC01960-201ENST00000563759 ACOT7O00154 380 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 ADRB1P08588 477 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 ACVR2AP27037 513 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 NR1H2P55055 460 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 AADACL4Q5VUY2 407 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 JAZF1Q86VZ6 243 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 STX19Q8N4C7 294 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 TMEM251Q8N6I4 163 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 ZFP62Q8NB50 900 aaPredicted RBP19.72■□□□□ 0.75
LINC01960-201ENST00000563759 SLC37A3Q8NCC5 494 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 BBS1Q8NFJ9 593 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 MIB2Q96AX9 1013 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 KLHL15Q96M94 604 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 TSPAN32Q96QS1 320 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 MED20Q9H944 212 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 CNOT2Q9NZN8 540 aaKnown RBP19.72■□□□□ 0.75
LINC01960-201ENST00000563759 B3GALT5Q9Y2C3 310 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 ALPK2Q86TB3 2170 aa19.72■□□□□ 0.75
LINC01960-201ENST00000563759 TRIM64CA6NLI5 447 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 M0R3G1 203 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 HPNP05981 417 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 ITGADQ13349 1161 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 ZNF362Q5T0B9 420 aaPredicted RBP19.71■□□□□ 0.75
LINC01960-201ENST00000563759 TMPPEQ6ZT21 453 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 KCTD8Q6ZWB6 473 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 SLC22A16Q86VW1 577 aa19.71■□□□□ 0.75
LINC01960-201ENST00000563759 FKBP14Q9NWM8 211 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms