RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF621Q6ZSS3 439 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 SPATA21Q7Z572 469 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 MYPOPQ86VE0 399 aaPredicted RBP16.15■□□□□ 0.18
NME3-204ENST00000563498 VRK2Q86Y07 508 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 CCDC36Q8IYA8 594 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 ZCCHC24Q8N2G6 241 aaKnown RBP16.15■□□□□ 0.18
NME3-204ENST00000563498 MFSD8Q8NHS3 518 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 ZFAND2BQ8WV99 257 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 PKNOX2Q96KN3 472 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 TEX37Q96LM6 180 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 OR52E6Q96RD3 313 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 C20orf27Q9GZN8 174 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 DYNLRB1Q9NP97 96 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 CALML5Q9NZT1 146 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 P2RX2Q9UBL9 471 aa16.15■□□□□ 0.18
NME3-204ENST00000563498 IGHV2OR16-5A0A0B4J2B6 119 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 AHSA1O95433 338 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 KRT75O95678 551 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 IGFBP1P08833 259 aaPredicted RBP16.14■□□□□ 0.17
NME3-204ENST00000563498 IFNGR1P15260 489 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 UFM1P61960 85 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 ARF1P84077 181 aaKnown RBP16.14■□□□□ 0.17
NME3-204ENST00000563498 ADRM1Q16186 407 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 DEF8Q6ZN54 512 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 PNPT1Q8TCS8 783 aaKnown RBP16.14■□□□□ 0.17
NME3-204ENST00000563498 CKAP2Q8WWK9 683 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 SORT1Q99523 831 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 NUF2Q9BZD4 464 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 MEAF6Q9HAF1 191 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 METRNQ9UJH8 293 aa16.14■□□□□ 0.17
NME3-204ENST00000563498 ZNF443Q9Y2A4 671 aaPredicted RBP16.14■□□□□ 0.17
NME3-204ENST00000563498 WDR91A4D1P6 747 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 B4DSR2 109 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 FZD7O75084 574 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 SLC43A1O75387 559 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 GSNP06396 782 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 ALDOCP09972 364 aaKnown RBP16.13■□□□□ 0.17
NME3-204ENST00000563498 PNMTP11086 282 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 ZNF43P17038 809 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 NCF2P19878 526 aaPredicted RBP16.13■□□□□ 0.17
NME3-204ENST00000563498 CRISP3P54108 245 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 CLDN17P56750 224 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 LARS2Q15031 903 aaKnown RBP16.13■□□□□ 0.17
NME3-204ENST00000563498 TRIP10Q15642 601 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 C12orf54Q6X4T0 127 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.13■□□□□ 0.17
NME3-204ENST00000563498 ARMC7Q9H6L4 198 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 GPR35Q9HC97 309 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 AIG1Q9NVV5 245 aa16.13■□□□□ 0.17
NME3-204ENST00000563498 ADRA2AP08913 450 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 PRG2P13727 222 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 CFPP27918 469 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 IL12AP29459 219 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 SLC1A6P48664 564 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 EVX1P49640 407 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 MVDP53602 400 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 DAG1Q14118 895 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 CDK20Q8IZL9 346 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 KDM8Q8N371 416 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 CLIP4Q8N3C7 705 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 GPR137CQ8N3F9 429 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 SLC38A5Q8WUX1 472 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 SLC35B4Q969S0 331 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 OXGR1Q96P68 337 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 PTDSS2Q9BVG9 487 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 NOX3Q9HBY0 568 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 B3GAT1Q9P2W7 334 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 ZNF232Q9UNY5 417 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 USP22Q9UPT9 525 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 CMAHPQ9Y471 501 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 CHST2Q9Y4C5 530 aa16.12■□□□□ 0.17
NME3-204ENST00000563498 SH3PXD2BA1X283 911 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 ZNF503-AS2A6NEH8 195 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 RFXANKO14593 260 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 NR4A1P22736 598 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 GTF2E2P29084 291 aaKnown RBP16.11■□□□□ 0.17
NME3-204ENST00000563498 NME5P56597 212 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 EGR4Q05215 589 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 NPRL3Q12980 569 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 SNTB2Q13425 540 aaKnown RBP16.11■□□□□ 0.17
NME3-204ENST00000563498 CEACAM16Q2WEN9 425 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 RINLQ6ZS11 566 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 SERPINA11Q86U17 422 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 GLCCI1Q86VQ1 547 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 GLB1L3Q8NCI6 653 aaPredicted RBP16.11■□□□□ 0.17
NME3-204ENST00000563498 PIK3C3Q8NEB9 887 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 SLC25A36Q96CQ1 311 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 ZBTB18Q99592 522 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 TMEM109Q9BVC6 243 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 PLA2G12AQ9BZM1 189 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 CRLF2Q9HC73 371 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 SSU72Q9NP77 194 aaKnown RBP16.11■□□□□ 0.17
NME3-204ENST00000563498 THUMPD1Q9NXG2 353 aaKnown RBP16.11■□□□□ 0.17
NME3-204ENST00000563498 GPR45Q9Y5Y3 372 aa16.11■□□□□ 0.17
NME3-204ENST00000563498 TENM1Q9UKZ4 2725 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 LOC102725191A0A1B0GVB3 256 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 ZNF99A8MXY4 864 aaPredicted RBP16.1■□□□□ 0.17
NME3-204ENST00000563498 BCHEP06276 602 aa16.1■□□□□ 0.17
NME3-204ENST00000563498 RPS5P46782 204 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms