RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 MTPNP58546 118 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 IL1RL1Q01638 556 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 OR1Q1Q15612 314 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 RETREG3Q86VR2 466 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 CIARTQ8N365 385 aaPredicted RBP14.77□□□□□ -0.05
CLK3-210ENST00000563112 KDM8Q8N371 416 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 TAAR8Q969N4 342 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 HS6ST2Q96MM7 605 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 DHRS9Q9BPW9 319 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 PRR14Q9BWN1 585 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 TMEM120AQ9BXJ8 343 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 RSPO3Q9BXY4 272 aaPredicted RBP14.77□□□□□ -0.05
CLK3-210ENST00000563112 OBP2BQ9NPH6 170 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 ZANQ9Y493 2812 aa14.77□□□□□ -0.05
CLK3-210ENST00000563112 M0QX08 132 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 SLC43A1O75387 559 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 LY6G6DO95868 133 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 GRPRP30550 384 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 FABP6P51161 128 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 DMTNQ08495 405 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 CYLC2Q14093 348 aaPredicted RBP14.76□□□□□ -0.05
CLK3-210ENST00000563112 CLEC12BQ2HXU8 276 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 INTS11Q5TA45 600 aaKnown RBP14.76□□□□□ -0.05
CLK3-210ENST00000563112 HMBOX1Q6NT76 420 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 H1FNTQ75WM6 255 aaPredicted RBP14.76□□□□□ -0.05
CLK3-210ENST00000563112 PATL1Q86TB9 770 aaKnown RBP14.76□□□□□ -0.05
CLK3-210ENST00000563112 DTX2Q86UW9 622 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 COMTD1Q86VU5 262 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 PTOV1Q86YD1 416 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 FBXL14Q8N1E6 418 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 SMYD1Q8NB12 490 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 OR6S1Q8NH40 331 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 BOD1Q96IK1 185 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 LINC00470Q9BZP3 86 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 BARX1Q9HBU1 254 aaPredicted RBP14.76□□□□□ -0.05
CLK3-210ENST00000563112 RCE1Q9Y256 329 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 ATP23Q9Y6H3 246 aa14.76□□□□□ -0.05
CLK3-210ENST00000563112 CSPG4Q6UVK1 2322 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 A0A087WUJ7 227 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 A0A0B4J2E0 115 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 A0A1B0GX12 115 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 E7EQL1 145 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 M0R082 166 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 LGI1O95970 557 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 CD8AP01732 235 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 C8BP07358 591 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 NQO1P15559 274 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 HOXB4P17483 251 aaPredicted RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 TTKP33981 857 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 ARFIP2P53365 341 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 PCBP3P57721 371 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 UBE2NP61088 152 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 VEZF1Q14119 521 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 SELPLGQ14242 412 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 KRTAP21-3Q3LHN1 58 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 TBRG1Q3YBR2 411 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 HIKESHIQ53FT3 197 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 SWT1Q5T5J6 900 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 ADPRHL1Q8NDY3 354 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 OR1K1Q8NGR3 316 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 ZNF417Q8TAU3 575 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 SLC26A7Q8TE54 656 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 ADAD1Q96M93 576 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 ALKBH3Q96Q83 286 aaPredicted RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 ZNF587Q96SQ5 575 aaPredicted RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 MCHR1Q99705 422 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 SH3GL1Q99961 368 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 ASPNQ9BXN1 380 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 KAT8Q9H7Z6 458 aaKnown RBP14.75□□□□□ -0.05
CLK3-210ENST00000563112 KLHL14Q9P2G3 628 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 CORINQ9Y5Q5 1042 aa14.75□□□□□ -0.05
CLK3-210ENST00000563112 IGKV1D-42A0A075B6H8 117 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 LOC102725191A0A1B0GVB3 256 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 FMO6PO60774 539 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 FZD7O75084 574 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 UPK3AO75631 287 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
CLK3-210ENST00000563112 HOXB1P14653 301 aaPredicted RBP14.74□□□□□ -0.05
CLK3-210ENST00000563112 PTNP21246 168 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 CBLP22681 906 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 SH3BGRP55822 239 aaPredicted RBP14.74□□□□□ -0.05
CLK3-210ENST00000563112 SLC25A3Q00325 362 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 SPOCK1Q08629 439 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 NRF1Q16656 503 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 MMEL1Q495T6 779 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 ZNF544Q6NX49 715 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 UEVLDQ8IX04 471 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 MUC15Q8N387 334 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 GPR137CQ8N3F9 429 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 C10orf53Q8N6V4 93 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 ANKK1Q8NFD2 765 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 OR10A6Q8NH74 314 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 ZNF317Q96PQ6 595 aaPredicted RBP14.74□□□□□ -0.05
CLK3-210ENST00000563112 KCNS3Q9BQ31 491 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 MOV10Q9HCE1 1003 aaKnown RBP14.74□□□□□ -0.05
CLK3-210ENST00000563112 CBLN4Q9NTU7 201 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 SEC14L4Q9UDX3 406 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 HIVEP2P31629 2446 aa14.74□□□□□ -0.05
CLK3-210ENST00000563112 M0R3H8 397 aa14.73□□□□□ -0.05
CLK3-210ENST00000563112 TPST2O60704 377 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms