RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 IRF4Q15306 451 aa12.22□□□□□ -0.45
CLK3-206ENST00000562078 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
CLK3-206ENST00000562078 TRIM40Q6P9F5 258 aa12.22□□□□□ -0.45
CLK3-206ENST00000562078 OR4K5Q8NGD3 323 aa12.22□□□□□ -0.45
CLK3-206ENST00000562078 FCRL4Q96PJ5 515 aa12.22□□□□□ -0.45
CLK3-206ENST00000562078 RHPN2P1A8MT19 583 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 KDM4EB2RXH2 506 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 PYCARD-AS1I3L0S3 204 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 RNASET2O00584 256 aaKnown RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 OIP5O43482 229 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 KHDRBS3O75525 346 aaKnown RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 SC5DO75845 299 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ARAFP10398 606 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ACP5P13686 325 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 MAPK3P27361 379 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 NTSR1P30989 418 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 SOAT1P35610 550 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ADH7P40394 386 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 MC1RQ01726 317 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 KRT33BQ14525 404 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 RPE65Q16518 533 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 SLC29A4Q7RTT9 530 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 CAMKMTQ7Z624 323 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 OR10H5Q8NGA6 315 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ACOT11Q8WXI4 607 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 C14orf79Q96F83 325 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 CPNE2Q96FN4 548 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 ALX4Q9H161 411 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 REEP4Q9H6H4 257 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 CHMP1AQ9HD42 196 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 TAC3Q9UHF0 121 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 A0A0A6YYC8 382 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 TMEM272A0A1B0GTI8 110 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 I3L1I5 382 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 PHYHO14832 338 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ADH1BP00325 375 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 PSMB5P28074 263 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 DCTDP32321 178 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 HCCSP53701 268 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 TAS2R60P59551 318 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 ENPP2Q13822 863 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 CLINT1Q14677 625 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 TMEM44Q2T9K0 475 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.45
CLK3-206ENST00000562078 FAM76BQ5HYJ3 339 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 TEX30Q5JUR7 227 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 OR13C5Q8NGS8 318 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
CLK3-206ENST00000562078 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 LATO43561 262 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 IL5P05113 134 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 BCHEP06276 602 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 HOXB2P14652 356 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 HPGDP15428 266 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 CD53P19397 219 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 DRD1P21728 446 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 C5AR1P21730 350 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 HTR2AP28223 471 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 RNF144AP50876 292 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 TGIF1Q15583 401 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 METRNLQ641Q3 311 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 C3orf33Q6P1S2 294 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 TSSK4Q6SA08 328 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 LCTLQ6UWM7 567 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 NKAIN4Q8IVV8 208 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 OR2AK2Q8NG84 335 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 OR5D16Q8NGK9 328 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 OR5K2Q8NHB8 316 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 ZNF471Q9BX82 626 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 TREM1Q9NP99 234 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 FARS2O95363 451 aaKnown RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 IGHA1P01876 353 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 KLK1P06870 262 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 ANXA2P07355 339 aaKnown RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 STARD6P59095 220 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 TAS2R50P59544 299 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 BPIFB3P59826 476 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 SPCS3P61009 180 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 TMEM196Q5HYL7 178 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 JMJD6Q6NYC1 403 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 COMTD1Q86VU5 262 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 C17orf64Q86WR6 236 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 CMTM4Q8IZR5 234 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 MUC20Q8N307 709 aaPredicted RBP12.2□□□□□ -0.46
CLK3-206ENST00000562078 SLC43A2Q8N370 569 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 OR51G2Q8NGK0 314 aa12.2□□□□□ -0.46
CLK3-206ENST00000562078 TCTEX1D2Q8WW35 142 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms