RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 BCAS4Q8TDM0 211 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 TMEM45BQ96B21 275 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 APH1AQ96BI3 265 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 MED18Q9BUE0 208 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 SF3B5Q9BWJ5 86 aaKnown RBP12.26□□□□□ -0.45
TPM1-230ENST00000561266 C20orf141Q9NUB4 165 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 SELENONQ9NZV5 590 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 GPR52Q9Y2T5 361 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
TPM1-230ENST00000561266 AKAP9Q99996 3911 aa12.26□□□□□ -0.45
TPM1-230ENST00000561266 PLPP3O14495 311 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 TRAF3IP2O43734 574 aaPredicted RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 OR2T1O43869 369 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 IFNA14P01570 189 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 FUT1P19526 365 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 COX5AP20674 150 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 CRYGSP22914 178 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 TAS2R41P59536 307 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 FAPQ12884 760 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 ITGADQ13349 1161 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 ZNF74Q16587 644 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 IQCCQ4KMZ1 466 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 FBXW9Q5XUX1 488 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 C5orf46Q6UWT4 87 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 AAED1Q7RTV5 226 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 CDC20BQ86Y33 519 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 OR6S1Q8NH40 331 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 FAM162AQ96A26 154 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 TXNDC15Q96J42 360 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 OXGR1Q96P68 337 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 POLDIP3Q9BY77 421 aaKnown RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 DCAF13Q9NV06 445 aaKnown RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 NDRG3Q9UGV2 375 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 RASD1Q9Y272 281 aa12.25□□□□□ -0.45
TPM1-230ENST00000561266 ANKRD17O75179 2603 aaKnown RBP12.25□□□□□ -0.45
TPM1-230ENST00000561266 MYO9AB2RTY4 2548 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 NDUFAB1O14561 156 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 UPK3AO75631 287 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 ZNF432O94892 652 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 OR5F1O95221 314 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 PLAUP00749 431 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 CLDN17P56750 224 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 TAB1Q15750 504 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 IFI44LQ53G44 452 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 PHYHD1Q5SRE7 291 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 WFDC8Q8IUA0 241 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 UBE2J2Q8N2K1 259 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 C10orf53Q8N6V4 93 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 KISS1RQ969F8 398 aaPredicted RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 MPP4Q96JB8 637 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 C7orf34Q96L11 122 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 PRRC1Q96M27 445 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 CLEC4MQ9H2X3 399 aaPredicted RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 PLEKHF2Q9H8W4 249 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 SLC24A3Q9HC58 644 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 MRPL39Q9NYK5 338 aaKnown RBP12.24□□□□□ -0.45
TPM1-230ENST00000561266 TAS2R5Q9NYW4 299 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 B3GALT5Q9Y2C3 310 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 V9GYQ6 96 aa12.24□□□□□ -0.45
TPM1-230ENST00000561266 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 A0A1W2PR80 420 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 ENO4A6NNW6 628 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 ARPC2O15144 300 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 RAD51DO75771 328 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 UBOX5O94941 541 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 DIRAS1O95057 198 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 SEMG1P04279 462 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 ASAH2BP0C7U1 165 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 DNAJA1P31689 397 aaKnown RBP12.23□□□□□ -0.45
TPM1-230ENST00000561266 MXRA7P84157 204 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 VLDLRP98155 873 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 P2RY6Q15077 328 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 NIPAL3Q6P499 406 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 TBPL2Q6SJ96 375 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
TPM1-230ENST00000561266 PIK3IP1Q96FE7 263 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 CLPTM1LQ96KA5 538 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 EPYCQ99645 322 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 SLCO5A1Q9H2Y9 848 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 GORASP2Q9H8Y8 452 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 MED29Q9NX70 200 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 TAS2R1Q9NYW7 299 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 MALT1Q9UDY8 824 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
TPM1-230ENST00000561266 HEATR1Q9H583 2144 aaKnown RBP12.23□□□□□ -0.45
TPM1-230ENST00000561266 LOC102725191A0A1B0GVB3 256 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 C11orf98E9PRG8 122 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 PDE5AO76074 875 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 VAMP5O95183 116 aa12.22□□□□□ -0.45
TPM1-230ENST00000561266 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
TPM1-230ENST00000561266 MT-ND1P03886 318 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms