RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	SMUG1	Q53HV7	270 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	DCST2	Q5T1A1	773 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	PVRIG	Q6DKI7	326 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	ACSM5	Q6NUN0	579 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235		Q6ZR54	194 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	GPD1L	Q8N335	351 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	LINC00612	Q8N6U2	182 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	MRAP	Q8TCY5	172 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	FBXO32	Q969P5	355 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	VSIG2	Q96IQ7	327 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	RBM14	Q96PK6	669 aa	Known RBP	4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	TSG101	Q99816	390 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	SLC30A2	Q9BRI3	323 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	API5	Q9BZZ5	524 aa	Known RBP	4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	DRC3	Q9H069	523 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	VCX2	Q9H322	139 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	PSTPIP2	Q9H939	334 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	DMAP1	Q9NPF5	467 aa	Predicted RBP	4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	DPM3	Q9P2X0	92 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	LCMT1	Q9UIC8	334 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	GSTK1	Q9Y2Q3	226 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	FADS3	Q9Y5Q0	445 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	USP16	Q9Y5T5	823 aa		4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	ZNF646	O15015	1829 aa	Predicted RBP	4.04	□□□□□ -1.76
TCF12-223	ENST00000561235	TTC41P	Q6P2S7	1318 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	CHD8	Q9HCK8	2581 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	OR6C65	A6NJZ3	312 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RSPH10B2	B2RC85	870 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235		K7EQM0	130 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	FCN1	O00602	326 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	CDX4	O14627	284 aa	Predicted RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	PRRG1	O14668	218 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	XPO1	O14980	1071 aa	Known RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	CD55	P08174	381 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RSPH10B	P0C881	870 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RPA2	P15927	270 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	ZNF3	P17036	446 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	IL32	P24001	234 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	PSMA2	P25787	234 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	TAGLN2	P37802	199 aa	Known RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	PRRX1	P54821	245 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RND3	P61587	244 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	S100A12	P80511	92 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	VLDLR	P98155	873 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	DPYSL2	Q16555	572 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RABGAP1L	Q5R372	815 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	BAIAP2L2	Q6UXY1	529 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	TTC5	Q8N0Z6	440 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	PNPT1	Q8TCS8	783 aa	Known RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	RPL3L	Q92901	407 aa	Known RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	TCEANC2	Q96MN5	208 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	ZNF607	Q96SK3	696 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	CDX2	Q99626	313 aa	Predicted RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	DPH7	Q9BTV6	452 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	EDEM2	Q9BV94	578 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	DEFB126	Q9BYW3	111 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	SLC39A1	Q9NY26	324 aa		4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	COL2A1	P02458	1487 aa	Predicted RBP	4.03	□□□□□ -1.76
TCF12-223	ENST00000561235	SSC5D	A1L4H1	1573 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	CDHR2	Q9BYE9	1310 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235		A8MUI8	341 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	PPIAL4D	F5H284	164 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	HAT1	O14929	419 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	KRT6A	P02538	564 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	S100A9	P06702	114 aa	Known RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	FGF4	P08620	206 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	CLTA	P09496	248 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	UBTFL6	P0CB48	400 aa	Predicted RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	CCR1	P32246	355 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	DNAJC3	Q13217	504 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	TSC22D1	Q15714	1073 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	METTL11B	Q5VVY1	283 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	PMF1	Q6P1K2	205 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	C3orf62	Q6ZUJ4	267 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	SLC22A9	Q8IVM8	553 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	BHLHE23	Q8NDY6	225 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	OR2T3	Q8NH03	318 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	ENKUR	Q8TC29	256 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	ZPLD1	Q8TCW7	415 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	RAET1E	Q8TD07	263 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	MAIP1	Q8WWC4	291 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	KIFAP3	Q92845	792 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	PSMG2	Q969U7	264 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	MYLPF	Q96A32	169 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	SGK3	Q96BR1	496 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	EFHD2	Q96C19	240 aa	Predicted RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	SENP8	Q96LD8	212 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	NOL4L	Q96MY1	436 aa	Predicted RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	CATSPER2	Q96P56	530 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	MTG1	Q9BT17	334 aa	Predicted RBP	4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	FAM192A	Q9GZU8	254 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	VCX	Q9H320	206 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	VSIG4	Q9Y279	399 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	SMAD5-AS1	Q9Y6J3	95 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	UNC79	Q9P2D8	2635 aa		4.02	□□□□□ -1.77
TCF12-223	ENST00000561235	TONSL	Q96HA7	1378 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms