RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 POLDIP3Q9BY77 421 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 AMBRA1Q9C0C7 1298 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 PLEKHF2Q9H8W4 249 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 PARPBPQ9NWS1 579 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 MRPL39Q9NYK5 338 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 ADA2Q9NZK5 511 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 C6orf203Q9P0P8 240 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 EGFL7Q9UHF1 273 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 CORINQ9Y5Q5 1042 aa13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 ANKRD17O75179 2603 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-213ENST00000560856 TRAF3IP2O43734 574 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 LYZL6O75951 148 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF432O94892 652 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 SERPINA1P01009 418 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 ITGA5P08648 1049 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 ZNF74Q16587 644 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 GLYATQ6IB77 296 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 TTC33Q6PID6 262 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 BHLHA15Q7RTS1 189 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 SCAIQ8N9R8 606 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 LZICQ8WZA0 190 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 KISS1RQ969F8 398 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 NSL1Q96IY1 281 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 CDRT15Q96T59 188 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 SLC19A3Q9BZV2 496 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 LIME1Q9H400 295 aa13.46□□□□□ -0.25
SNRPA1-213ENST00000560856 PLPP3O14495 311 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 FFAR1O14842 300 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 PRSS23O95084 383 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 ZNF682O95780 498 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 MT-ATP6P00846 226 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 THRBP10828 461 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 HLA-DOBP13765 273 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 IL32P24001 234 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 SELENOPP49908 381 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 UGT2B15P54855 530 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 TAS2R41P59536 307 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 LGALS3BPQ08380 585 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 TAB1Q15750 504 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 SLC46A3Q7Z3Q1 461 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 DEFB107AQ8IZN7 70 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 RBM15BQ8NDT2 890 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 HSH2DQ96JZ2 352 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 PRRC1Q96M27 445 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 HS3ST6Q96QI5 342 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 GORASP2Q9H8Y8 452 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 MAN2C1Q9NTJ4 1040 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 DCAF13Q9NV06 445 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 ASB6Q9NWX5 421 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 OTOGQ6ZRI0 2925 aa13.45□□□□□ -0.26
SNRPA1-213ENST00000560856 B2RBV5 119 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 J3KTA2 159 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 CH25HO95992 272 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 ASAH2BP0C7U1 165 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 ZNF43P17038 809 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 GTF2E2P29084 291 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 MSX2P35548 267 aaPredicted RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 RBM34P42696 430 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 CLDN17P56750 224 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 FAPQ12884 760 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 IQCCQ4KMZ1 466 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 IFI44LQ53G44 452 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 LINGO2Q7L985 606 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 WDFY1Q8IWB7 410 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 UBE2J2Q8N2K1 259 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 LRRC17Q8N6Y2 441 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 FAM86B1Q8N7N1 296 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 OR5J2Q8NH18 312 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 TMEM255BQ8WV15 326 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 HSD17B8Q92506 261 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 C7orf34Q96L11 122 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 USB1Q9BQ65 265 aaKnown RBP13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 ASPNQ9BXN1 380 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 SLCO5A1Q9H2Y9 848 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 FKRPQ9H9S5 495 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 TAS2R16Q9NYV7 291 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 TAS2R5Q9NYW4 299 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 RCE1Q9Y256 329 aa13.44□□□□□ -0.26
SNRPA1-213ENST00000560856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 OR5H1A6NKK0 313 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 KPNA4O00629 521 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 UPK3AO75631 287 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 IGF2P01344 180 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 MT-ND1P03886 318 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 IFNW1P05000 195 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 TCN1P20061 433 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 DNAJA1P31689 397 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 YAP1P46937 504 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 MNAT1P51948 309 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 PUDPQ08623 228 aa13.43□□□□□ -0.26
SNRPA1-213ENST00000560856 ZP4Q12836 540 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms