RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 RMND5AQ9H871 391 aa8.84□□□□□ -0.99
SNRPA1-212ENST00000560496 BCL2L10Q9HD36 194 aa8.84□□□□□ -0.99
SNRPA1-212ENST00000560496 OBP2BQ9NPH6 170 aa8.84□□□□□ -0.99
SNRPA1-212ENST00000560496 SLC25A37Q9NYZ2 338 aa8.84□□□□□ -0.99
SNRPA1-212ENST00000560496 PCDHB14Q9Y5E9 798 aa8.84□□□□□ -0.99
SNRPA1-212ENST00000560496 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -13e-8■■■■■ 46.1
SNRPA1-212ENST00000560496 IGKV1D-42A0A075B6H8 117 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 TRBV5-3A0A0A0MS03 114 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ZNF587BE7ETH6 402 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 UBDO15205 165 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ZNF432O94892 652 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 VAMP5O95183 116 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 AHSA1O95433 338 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 IGKV3-15P01624 115 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 CSF3P09919 207 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 CECR9P0C854 216 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ARAFP10398 606 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 NCF2P19878 526 aaPredicted RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 CALCRP30988 508 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 RPS5P46782 204 aaKnown RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 COPZ1P61923 177 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 TUBA1BP68363 451 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 TUBA4AP68366 448 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 NAAAQ02083 359 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 FADDQ13158 208 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ZSWIM7Q19AV6 140 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ZNF311Q5JNZ3 666 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 C6orf10Q5SRN2 563 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 LRIF1Q5T3J3 769 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 HMBOX1Q6NT76 420 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 TUBA1AQ71U36 451 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 FUNDC1Q8IVP5 155 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 MIER2Q8N344 545 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 MFSD8Q8NHS3 518 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 BBS10Q8TAM1 723 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 MAGEE2Q8TD90 523 aaPredicted RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 BCL2L2Q92843 193 aaPredicted RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 SLC35B4Q969S0 331 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 KTI12Q96EK9 354 aaPredicted RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 TMBIM4Q9HC24 238 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 CA10Q9NS85 328 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 TMEM160Q9NX00 188 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 THUMPD1Q9NXG2 353 aaKnown RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 RCE1Q9Y256 329 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 RASD1Q9Y272 281 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 IFT52Q9Y366 437 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 RRP15Q9Y3B9 282 aaKnown RBP8.83□□□□□ -1
SNRPA1-212ENST00000560496 USH1CQ9Y6N9 552 aa8.83□□□□□ -1
SNRPA1-212ENST00000560496 ALPK2Q86TB3 2170 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 RPL36A-HNRNPH2H7BZ11 118 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 M0R082 166 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 NR5A2O00482 541 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 TRAF3IP2O43734 574 aaPredicted RBP8.82□□□□□ -1
SNRPA1-212ENST00000560496 PDE5AO76074 875 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 CELA3BP08861 270 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 FAM157CP0CG43 387 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 IGFBP5P24593 272 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 PRKAR1BP31321 381 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 ROR2Q01974 943 aaKnown RBP8.82□□□□□ -1
SNRPA1-212ENST00000560496 CHRNB3Q05901 458 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 ADIPOQQ15848 244 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 CHRFAM7AQ494W8 412 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 TMEM225Q6GV28 225 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 PODNL1Q6PEZ8 512 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 WDFY1Q8IWB7 410 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 TMEM123Q8N131 208 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 KDM8Q8N371 416 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 LSMEM1Q8N8F7 131 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 ANKS4BQ8N8V4 417 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 ZNF417Q8TAU3 575 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 PROX1Q92786 737 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 FBXO17Q96EF6 278 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 ZNF837Q96EG3 531 aaPredicted RBP8.82□□□□□ -1
SNRPA1-212ENST00000560496 ZNF317Q96PQ6 595 aaPredicted RBP8.82□□□□□ -1
SNRPA1-212ENST00000560496 ZNF587Q96SQ5 575 aaPredicted RBP8.82□□□□□ -1
SNRPA1-212ENST00000560496 IKZF5Q9H5V7 419 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 C12orf10Q9HB07 376 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 MED4Q9NPJ6 270 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 SLC52A3Q9NQ40 469 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 SLAMF8Q9P0V8 285 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 KLHL14Q9P2G3 628 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 CDC42EP3Q9UKI2 254 aa8.82□□□□□ -1
SNRPA1-212ENST00000560496 A0A096LPE4 126 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 A0A1B0GWA3 101 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 A0A1W2PPZ6 126 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 OR6C65A6NJZ3 312 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 CLIC1O00299 241 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 F12P00748 615 aaPredicted RBP8.81□□□□□ -1
SNRPA1-212ENST00000560496 IGFBP1P08833 259 aaPredicted RBP8.81□□□□□ -1
SNRPA1-212ENST00000560496 ETS2P15036 469 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 USF1P22415 310 aaPredicted RBP8.81□□□□□ -1
SNRPA1-212ENST00000560496 PPOXP50336 477 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 SH3BGRP55822 239 aaPredicted RBP8.81□□□□□ -1
SNRPA1-212ENST00000560496 CLDN17P56750 224 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 SNRPD2P62316 118 aaKnown RBP8.81□□□□□ -1
SNRPA1-212ENST00000560496 EFNB3Q15768 340 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 HSP90B2PQ58FF3 399 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 PAGE3Q5JUK9 113 aa8.81□□□□□ -1
SNRPA1-212ENST00000560496 FAM69AQ5T7M9 428 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms