RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C1orf140Q5VVS0 124 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TMEM236Q5W0B7 351 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PPP4R4Q6NUP7 873 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FAHD1Q6P587 224 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ULK3Q6PHR2 472 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 TTC33Q6PID6 262 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 Q6ZS92 163 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 MBOAT2Q6ZWT7 520 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 GRINAQ7Z429 371 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FGD2Q7Z6J4 655 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 SIAH3Q8IW03 269 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 GTPBP8Q8N3Z3 284 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 CISD2Q8N5K1 135 aaKnown RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 C10orf53Q8N6V4 93 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ATG16L2Q8NAA4 619 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OR8D4Q8NGM9 314 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 MOSPD2Q8NHP6 518 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PIGXQ8TBF5 258 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 MAGEE2Q8TD90 523 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 GIPC3Q8TF64 312 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OIT3Q8WWZ8 545 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ACOT11Q8WXI4 607 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 SLC38A4Q969I6 547 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 SLC25A36Q96CQ1 311 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ZNF845Q96IR2 970 aaPredicted RBP4.68□□□□□ -1.66
SPG11-220ENST00000559933 SFXN2Q96NB2 322 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OR5B2Q96R09 309 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 FEVQ99581 238 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 BDH2Q9BUT1 245 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ZNF426Q9BUY5 554 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 OR2B2Q9GZK3 357 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ENKD1Q9H0I2 346 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 GABARAPL1Q9H0R8 117 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 RIBC2Q9H4K1 309 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PTGES2Q9H7Z7 377 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 YY1AP1Q9H869 796 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 KLHL13Q9P2N7 655 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 AASSQ9UDR5 926 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 CHRNA9Q9UGM1 479 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 NPIPA1Q9UND3 350 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 B3GNT3Q9Y2A9 372 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PCDHGB5Q9Y5G0 923 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 ZNF407Q9C0G0 2248 aa4.68□□□□□ -1.66
SPG11-220ENST00000559933 PRRC2CQ9Y520 2896 aaKnown RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 UNC119BA6NIH7 251 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 FAM47E-STBD1D6RA91 191 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 MCIDASD6RGH6 385 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 C11orf98E9PRG8 122 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KLRC4-KLRK1H3BQV0 150 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 IMPA2O14732 288 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SHOXO15266 292 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 CXCL13O43927 109 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 DPM1O60762 260 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 NPIPB7O75200 414 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 OR7A10O76100 309 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 AKR7A3O95154 331 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 HPRP00739 348 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 PLGP00747 810 aaPredicted RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 PRB1P04280 392 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ALPLP05186 524 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 HPNP05981 417 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 CD3EP07766 207 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 GNAO1P09471 354 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SAGP10523 405 aaPredicted RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 HLA-DOBP13765 273 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZNF17P17021 662 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 POU3F2P20265 443 aaPredicted RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 VAMP1P23763 118 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 POU1F1P28069 291 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 GRPRP30550 384 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SLC9A3P48764 834 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 LHX2P50458 406 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ALDH3A2P51648 485 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 HMGA2P52926 109 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 DLX5P56178 289 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 NUP107P57740 925 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 MYBPHQ13203 477 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SELENBP1Q13228 472 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KIR3DS1Q14943 382 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZNF74Q16587 644 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZSWIM7Q19AV6 140 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SLC36A3Q495N2 470 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SYT14P1Q58G82 188 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SLC25A53Q5H9E4 307 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KDM4DQ6B0I6 523 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 C3orf33Q6P1S2 294 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 IGFL3Q6UXB1 125 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 C3P1Q6ZMU1 363 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 ZBTB49Q6ZSB9 765 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 NCCRP1Q6ZVX7 275 aaPredicted RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 BCDIN3DQ7Z5W3 292 aaKnown RBP4.67□□□□□ -1.66
SPG11-220ENST00000559933 GGNQ86UU5 652 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SLC22A16Q86VW1 577 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 GHDCQ8N2G8 530 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 KDM8Q8N371 416 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 SVOPLQ8N434 492 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 OR5M9Q8NGP3 310 aa4.67□□□□□ -1.66
SPG11-220ENST00000559933 OR4Q3Q8NH05 313 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms