RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 CUBNO60494 3623 aa15.48■□□□□ 0.07
HDDC3-205ENST00000559898 MS4A18H0YCH9 400 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 GPRIN2O60269 458 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 EDF1O60869 148 aaKnown RBP15.47■□□□□ 0.07
HDDC3-205ENST00000559898 SEC14L2O76054 403 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 MFN2O95140 757 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 THY1P04216 161 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 CELA3BP08861 270 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 OR1Q1Q15612 314 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 ZSWIM7Q19AV6 140 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 MS4A18Q3C1V0 323 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 ALG10BQ5I7T1 473 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 WDR88Q6ZMY6 472 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 HDXQ7Z353 690 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 DHDDSQ86SQ9 333 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 MUC15Q8N387 334 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 LSMEM1Q8N8F7 131 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 POMGNT2Q8NAT1 580 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 C1orf162Q8NEQ5 155 aaPredicted RBP15.47■□□□□ 0.07
HDDC3-205ENST00000559898 MOGAT1Q96PD6 335 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 ALG2Q9H553 416 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 TMEM38AQ9H6F2 299 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 ARMC7Q9H6L4 198 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 CACYBPQ9HB71 228 aaKnown RBP15.47■□□□□ 0.07
HDDC3-205ENST00000559898 CBLN4Q9NTU7 201 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 RPS6KB2Q9UBS0 482 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 USP22Q9UPT9 525 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 RASD1Q9Y272 281 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 AMDHD2Q9Y303 409 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 DNHD1Q96M86 4753 aa15.47■□□□□ 0.07
HDDC3-205ENST00000559898 A0A096LNT2 108 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 A0A0B4J2E0 115 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 A0A1B0GX12 115 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 FAM171A2A8MVW0 826 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 HMGB1P1B2RPK0 211 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-205ENST00000559898 FBP2O00757 339 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 TRAF3IP2O43734 574 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-205ENST00000559898 BGLAPP02818 100 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.07
HDDC3-205ENST00000559898 ROR2Q01974 943 aaKnown RBP15.46■□□□□ 0.07
HDDC3-205ENST00000559898 DUSP7Q16829 419 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 MST1LQ2TV78 715 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 AGAP6Q5VW22 663 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 NHLRC1Q6VVB1 395 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 C17orf78Q8N4C9 275 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 RNF217Q8TC41 542 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 SLC35B4Q969S0 331 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 ANKRD27Q96NW4 1050 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 CGREF1Q99674 301 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 EMC6Q9BV81 110 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 GRIP2Q9C0E4 1043 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 PIF1Q9H611 641 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 LEF1Q9UJU2 399 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-205ENST00000559898 MGAT4BQ9UQ53 548 aa15.46■□□□□ 0.07
HDDC3-205ENST00000559898 ZNF587BE7ETH6 402 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 KRT33AO76009 404 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 LYPD3O95274 346 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 SLC6A2P23975 617 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 CALCRP30988 508 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 GZMMP51124 257 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 CRYBA2P53672 197 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 CDH12P55289 794 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 RGS8P57771 180 aaPredicted RBP15.45■□□□□ 0.06
HDDC3-205ENST00000559898 PRPS1P60891 318 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
HDDC3-205ENST00000559898 CARD17Q5XLA6 110 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 CGB2Q6NT52 195 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 ARMC8Q8IUR7 673 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 ZNF525Q8N782 197 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 HIPK4Q8NE63 616 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 SLC38A4Q969I6 547 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 TXNDC15Q96J42 360 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 HS6ST2Q96MM7 605 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 OXGR1Q96P68 337 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 GPR35Q9HC97 309 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 TMEM45AQ9NWC5 275 aa15.45■□□□□ 0.06
HDDC3-205ENST00000559898 ABCA1O95477 2261 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 TRAV36DV7A0A075B6V5 113 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 A0A087WUJ7 227 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 A0A0G2JND7 137 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 EVPLLA8MZ36 301 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 VAMP5O95183 116 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 ZNF43P17038 809 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 PPIBP23284 216 aaKnown RBP15.44■□□□□ 0.06
HDDC3-205ENST00000559898 FAM69AQ5T7M9 428 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 TMEM123Q8N131 208 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 FBXL14Q8N1E6 418 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 DPP10Q8N608 796 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 OR6T1Q8NGN1 323 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 NANOS1Q8WY41 292 aaKnown RBP15.44■□□□□ 0.06
HDDC3-205ENST00000559898 BOD1Q96IK1 185 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 OR2M2Q96R28 347 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 ARHGDIGQ99819 225 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 LINC00470Q9BZP3 86 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 C12orf10Q9HB07 376 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 FAIMQ9NVQ4 179 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 MED29Q9NX70 200 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 NDUFAF1Q9Y375 327 aa15.44■□□□□ 0.06
HDDC3-205ENST00000559898 CHD3Q12873 2000 aaKnown RBP15.44■□□□□ 0.06
HDDC3-205ENST00000559898 HIVEP2P31629 2446 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms