RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MRPL39Q9NYK5 338 aaKnown RBP10.12□□□□□ -0.79
SNX1-204ENST00000559061 TAS2R5Q9NYW4 299 aa10.12□□□□□ -0.79
SNX1-204ENST00000559061 PROCRQ9UNN8 238 aa10.12□□□□□ -0.79
SNX1-204ENST00000559061 POMPQ9Y244 141 aa10.12□□□□□ -0.79
SNX1-204ENST00000559061 EMC9Q9Y3B6 208 aa10.12□□□□□ -0.79
SNX1-204ENST00000559061 LOC102725191A0A1B0GVB3 256 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 A0A1W2PRQ8 180 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 CDC42EP2O14613 210 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 SIAH2O43255 324 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 KLF4O43474 513 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 OR2T1O43869 369 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 OR7A10O76100 309 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 PLGP00747 810 aaPredicted RBP10.11□□□□□ -0.79
SNX1-204ENST00000559061 IGF2P01344 180 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 IGHV3-9P01782 118 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 RHCEP18577 417 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 UQCRC1P31930 480 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 PCYT1AP49585 367 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 SELENOPP49908 381 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 CTBP2P56545 445 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 ST3GAL3Q11203 375 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 TRAP1Q12931 704 aaKnown RBP10.11□□□□□ -0.79
SNX1-204ENST00000559061 DGCR6Q14129 220 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 TRAM2Q15035 370 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 TSC22D1Q15714 1073 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 TMEM201Q5SNT2 666 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 PODNL1Q6PEZ8 512 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 STAC2Q6ZMT1 411 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 H1FNTQ75WM6 255 aaPredicted RBP10.11□□□□□ -0.79
SNX1-204ENST00000559061 NRMQ8IXM6 262 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 SCAIQ8N9R8 606 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 LRRC75AQ8NAA5 344 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 OR4C15Q8NGM1 316 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 ZHX1-C8orf76Q96EF9 292 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 PIP5K1AQ99755 562 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 NAA11Q9BSU3 229 aaPredicted RBP10.11□□□□□ -0.79
SNX1-204ENST00000559061 SF3B5Q9BWJ5 86 aaKnown RBP10.11□□□□□ -0.79
SNX1-204ENST00000559061 TAPBPLQ9BX59 468 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 FKRPQ9H9S5 495 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 SELENONQ9NZV5 590 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 B3GALT5Q9Y2C3 310 aa10.11□□□□□ -0.79
SNX1-204ENST00000559061 UNC79Q9P2D8 2635 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 TCRBV3S1A0A5B6 114 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MT-ATP6P00846 226 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 THBDP07204 575 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 H1F0P07305 194 aaKnown RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 ITGA5P08648 1049 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 COX5AP20674 150 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 IGHV1-2P23083 117 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 UGT2B10P36537 528 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 CD79BP40259 229 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 OMPP47874 163 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 ERFP50548 548 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 FXYD6P3P58550 94 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 RPS4XP62701 263 aaKnown RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 PRKCDQ05655 676 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MTX3Q5HYI7 312 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 PHYHD1Q5SRE7 291 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 TSPO2Q5TGU0 170 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 EEF1A1P5Q5VTE0 462 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 GTF2IRD2BQ6EKJ0 949 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MEX3BQ6ZN04 569 aaKnown RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 GALNT5Q7Z7M9 940 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 GPAT4Q86UL3 456 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 GTF2IRD2Q86UP8 949 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 CXorf67Q86X51 503 aaPredicted RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 ZDHHC21Q8IVQ6 265 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MCEMP1Q8IX19 187 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 OR5J2Q8NH18 312 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MOSPD2Q8NHP6 518 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 ACOT11Q8WXI4 607 aaPredicted RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 TXNDC15Q96J42 360 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 OXGR1Q96P68 337 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 SEPHS2Q99611 448 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 EPYCQ99645 322 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 TACO1Q9BSH4 297 aaKnown RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 FNDC11Q9BVV2 318 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 ANKRD19PQ9H560 264 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 MAGIXQ9H6Y5 334 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 CRIM1Q9NZV1 1036 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 ZNF229Q9UJW7 825 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 RASD1Q9Y272 281 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 NOSIPQ9Y314 301 aaKnown RBP10.1□□□□□ -0.79
SNX1-204ENST00000559061 TESMINQ9Y4I5 508 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 CORINQ9Y5Q5 1042 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 CSMD2Q7Z408 3487 aa10.1□□□□□ -0.79
SNX1-204ENST00000559061 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
SNX1-204ENST00000559061 FLNBO75369 2602 aaKnown RBP10.09□□□□□ -0.79
SNX1-204ENST00000559061 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
SNX1-204ENST00000559061 SH3PXD2BA1X283 911 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 FABP3P05413 133 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 IFI30P13284 250 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 LOXP28300 417 aaPredicted RBP10.09□□□□□ -0.79
SNX1-204ENST00000559061 RRM2P31350 389 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 GPR4P46093 362 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 SORDQ00796 357 aa10.09□□□□□ -0.79
SNX1-204ENST00000559061 RPL18Q07020 188 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms