RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 IGKV1D-17A0A075B6S4 117 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 NSG1A0A0A6YYJ2 146 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 LRP5LA4QPB2 252 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 C12orf71A8MTZ7 269 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 F5H6K3 240 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 SMPD2O60906 423 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 IFNB1P01574 187 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 IGLV2-23P01705 113 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 IGLV3-19P01714 112 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 KRT8P05787 483 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 CISD3P0C7P0 127 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF286BP0CG31 522 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 NCF1P14598 390 aaPredicted RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 GPM6AP51674 278 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 KLRC3Q07444 240 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 GNMTQ14749 295 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 RIPPLY2Q5TAB7 128 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 NCR3LG1Q68D85 454 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 ZSCAN25Q6NSZ9 544 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 SYT14Q8NB59 555 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 OR1N2Q8NGR9 330 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 OR10T2Q8NGX3 314 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 OR1F12Q8NHA8 337 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 RSPH1Q8WYR4 309 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 FRZBQ92765 325 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 SYAP1Q96A49 352 aaPredicted RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 EFHD2Q96C19 240 aaPredicted RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF578Q96N58 590 aaPredicted RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 MRPL45Q9BRJ2 306 aaKnown RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 THUMPD2Q9BTF0 503 aaKnown RBP1.96□□□□□ -2.1
VPS13C-207ENST00000558919 RBKSQ9H477 322 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 REEP4Q9H6H4 257 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 COQ10BQ9H8M1 238 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 ELOVL3Q9HB03 270 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 TM9SF3Q9HD45 589 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 SLC35D1Q9NTN3 355 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 KCNIP1Q9NZI2 227 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 PCYOX1Q9UHG3 505 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF835Q9Y2P0 537 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 AP1M2Q9Y6Q5 423 aa1.96□□□□□ -2.1
VPS13C-207ENST00000558919 FANCIQ9NVI1 1328 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 PCM1Q15154 2024 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 KIR2DL5BA0A0G2JN68 375 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 KIR2DL5BA0A0G2JPC4 375 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 NDC80O14777 642 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ANGPT2O15123 496 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 IDH1O75874 414 aaKnown RBP1.95□□□□□ -2.1
VPS13C-207ENST00000558919 CTDNEP1O95476 244 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 AP2A1O95782 977 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 GUCA1CO95843 209 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 IGKV1-17P01599 117 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 GCAP28676 217 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 BTCP35070 178 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 DDOSTP39656 456 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 UBE2AP49459 152 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 HMGCS1Q01581 520 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 SMARCB1Q12824 385 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 VGLL4Q14135 290 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 SELPLGQ14242 412 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ABCA11PQ4W5N1 156 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 LY6G6FQ5SQ64 297 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 OR52E8Q6IFG1 317 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 PYHIN1Q6K0P9 492 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 KCNIP4Q6PIL6 250 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 LYPD2Q6UXB3 125 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 C19orf35Q6ZS72 473 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 NLRP9Q7RTR0 991 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 CCDC50Q8IVM0 306 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 SLC35F2Q8IXU6 374 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 SLC38A6Q8IZM9 456 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 KIR2DL5AQ8N109 375 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF615Q8N8J6 731 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ZFP90Q8TF47 636 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 PELI1Q96FA3 418 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 TSGA13Q96PP4 275 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ECSITQ9BQ95 431 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 DNTTIP1Q9H147 329 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 RNF167Q9H6Y7 350 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 ZFP14Q9HCL3 533 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 SEC14L3Q9UDX4 400 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 OR12D3Q9UGF7 316 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 PCSK1NQ9UHG2 260 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 RPH3ALQ9UNE2 315 aa1.95□□□□□ -2.1
VPS13C-207ENST00000558919 YTHDF2Q9Y5A9 579 aaKnown RBP1.95□□□□□ -2.1
VPS13C-207ENST00000558919 DOCK9Q9BZ29 2069 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 A0A0U1RQS6 177 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 RBMY1BA6NDE4 496 aaKnown RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 RBMY1EA6NEQ0 496 aaKnown RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 A8MUI8 341 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 C12orf77C9JDV5 145 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 B4GALT5O43286 388 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 CD5LO43866 347 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 PEX11AO75192 247 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 RBMY1DP0C7P1 496 aaKnown RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 RBMY1A1P0DJD3 496 aaKnown RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 PNMTP11086 282 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 OMGP23515 440 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 CA8P35219 290 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 C1orf61Q13536 156 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 TAF7Q15545 349 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms