RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TAAR8Q969N4 342 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 C7orf26Q96N11 449 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 TNFRSF13CQ96RJ3 184 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 RAD21L1Q9H4I0 556 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 TCF7L2Q9NQB0 619 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 VAPAQ9P0L0 249 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 SEC14L4Q9UDX3 406 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 GMEB1Q9Y692 573 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 FZD7O75084 574 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 ERLIN1O75477 346 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 LY6HO94772 140 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 ARAFP10398 606 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 EFNA4P52798 201 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CLDN17P56750 224 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CHRNB3Q05901 458 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 LOXL1Q08397 574 aaPredicted RBP10.03□□□□□ -0.8
CASC4-205ENST00000558735 AGBL2Q5U5Z8 902 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 NIPAL3Q6P499 406 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 KLHL24Q6TFL4 600 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CLEC2AQ6UVW9 174 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 C6orf89Q6UWU4 347 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 GOLGA6L1Q8N7Z2 621 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 NFKBIDQ8NI38 313 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 MAGEE2Q8TD90 523 aaPredicted RBP10.03□□□□□ -0.8
CASC4-205ENST00000558735 SPDL1Q96EA4 605 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 FBXO17Q96EF6 278 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 ZNF837Q96EG3 531 aaPredicted RBP10.03□□□□□ -0.8
CASC4-205ENST00000558735 OXGR1Q96P68 337 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 WFDC6Q9BQY6 131 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CCDC28BQ9BUN5 200 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 NELFAQ9H3P2 528 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 IKZF5Q9H5V7 419 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CACYBPQ9HB71 228 aaKnown RBP10.03□□□□□ -0.8
CASC4-205ENST00000558735 OBP2BQ9NPH6 170 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CCDC167Q9P0B6 97 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 B3GAT1Q9P2W7 334 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 CRNNQ9UBG3 495 aaPredicted RBP10.03□□□□□ -0.8
CASC4-205ENST00000558735 LPAR3Q9UBY5 353 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 PMF1-BGLAPU3KQ54 211 aa10.03□□□□□ -0.8
CASC4-205ENST00000558735 IGKV1D-42A0A075B6H8 117 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 A0A096LPE4 126 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 TRBV5-3A0A0A0MS03 114 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 ARPC4-TTLL3A0A0A6YYG9 625 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 LOC102725191A0A1B0GVB3 256 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 A0A1B0GWA3 101 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 A0A1W2PPZ6 126 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 OR6C65A6NJZ3 312 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 MS4A18H0YCH9 400 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 RPL36A-HNRNPH2H7BZ11 118 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 POLR3GO15318 223 aaPredicted RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 TPST2O60704 377 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 BMP4P12644 408 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 ZNF43P17038 809 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 GPX2P18283 190 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 HTR2AP28223 471 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 PRKAR1BP31321 381 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 STX1BP61266 288 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 TUBA1BP68363 451 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 TUBA4AP68366 448 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 ARF1P84077 181 aaKnown RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 CDK6Q00534 326 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 ADRM1Q16186 407 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 TMEM249Q2WGJ8 235 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 MS4A18Q3C1V0 323 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 REEP3Q6NUK4 255 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 DHRS4L2Q6PKH6 230 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 NHLRC1Q6VVB1 395 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 TUBA1AQ71U36 451 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 C10orf105Q8TEF2 133 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 FAM168AQ92567 244 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 SLC38A4Q969I6 547 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 ALKBH3Q96Q83 286 aaPredicted RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 SLC38A2Q96QD8 506 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 C19orf24Q9BVV8 132 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 RPS6KB2Q9UBS0 482 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 YLPM1P49750 1951 aaKnown RBP10.02□□□□□ -0.81
CASC4-205ENST00000558735 ARFGEF3Q5TH69 2177 aa10.02□□□□□ -0.81
CASC4-205ENST00000558735 SVEP1Q4LDE5 3571 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.01□□□□□ -0.81
CASC4-205ENST00000558735 M0R082 166 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 OR2T1O43869 369 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 IGLV1-44P01699 117 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 SLC25A16P16260 332 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 CBLP22681 906 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 PAX7P23759 505 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 GRPRP30550 384 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 SERPINF1P36955 418 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 AQP5P55064 265 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 UBE2NP61088 152 aaKnown RBP10.01□□□□□ -0.81
CASC4-205ENST00000558735 VLDLRP98155 873 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 NAAAQ02083 359 aa10.01□□□□□ -0.81
CASC4-205ENST00000558735 HGFACQ04756 655 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms