RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PDLIM4P50479 330 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 NCALDP61601 193 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 ARF1P84077 181 aaKnown RBP13.54□□□□□ -0.24
TPM1-211ENST00000558314 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
TPM1-211ENST00000558314 NPRL3Q12980 569 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 IQCCQ4KMZ1 466 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 EPGNQ6UW88 154 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 ZNF417Q8TAU3 575 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
TPM1-211ENST00000558314 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 SORCS2Q96PQ0 1159 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 ZNF587Q96SQ5 575 aaPredicted RBP13.54□□□□□ -0.24
TPM1-211ENST00000558314 PTDSS2Q9BVG9 487 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 BEX2Q9BXY8 128 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 PIF1Q9H611 641 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 CHODLQ9H9P2 273 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 TCF7L2Q9NQB0 619 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 CCDC167Q9P0B6 97 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.54□□□□□ -0.24
TPM1-211ENST00000558314 SLC13A4Q9UKG4 626 aa13.54□□□□□ -0.24
TPM1-211ENST00000558314 A0A096LNT2 108 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 OR6C65A6NJZ3 312 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 NPIPB7O75200 414 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 SERPINI2O75830 405 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
TPM1-211ENST00000558314 CELA3BP08861 270 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 OR4A8P0C604 315 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 CECR9P0C854 216 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 GRPRP30550 384 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 SERPINF1P36955 418 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 EGR4Q05215 589 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 FADDQ13158 208 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 ALG10BQ5I7T1 473 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 CYB5R2Q6BCY4 276 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 ANKRD16Q6P6B7 361 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 KRT73Q86Y46 540 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 LRRC8CQ8TDW0 803 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 SLC38A4Q969I6 547 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 TAAR8Q969N4 342 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 BCL2L10Q9HD36 194 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 CA10Q9NS85 328 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 SLC25A37Q9NYZ2 338 aa13.53□□□□□ -0.24
TPM1-211ENST00000558314 ATRQ13535 2644 aa13.52□□□□□ -0.24
TPM1-211ENST00000558314 SH3PXD2BA1X283 911 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 M0R3G1 203 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 AIM2O14862 343 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 TPST1O60507 370 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 CSF3P09919 207 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 IGHV4-31P0DP07 118 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 HTR2AP28223 471 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 CALCRP30988 508 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 IDH3GP51553 393 aaPredicted RBP13.52□□□□□ -0.25
TPM1-211ENST00000558314 SLC18A1P54219 525 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPM1-211ENST00000558314 VLDLRP98155 873 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 CDK6Q00534 326 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 NAAAQ02083 359 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 SWI5Q1ZZU3 235 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 MST1LQ2TV78 715 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 CEACAM16Q2WEN9 425 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 AGKQ53H12 422 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 REEP3Q6NUK4 255 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 IL17RELQ6ZVW7 336 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 DYDC1Q8WWB3 177 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 SPDL1Q96EA4 605 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 OXGR1Q96P68 337 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 SPATA5L1Q9BVQ7 753 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 SHARPINQ9H0F6 387 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 GPR35Q9HC97 309 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.25
TPM1-211ENST00000558314 TRAV36DV7A0A075B6V5 113 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 AKAP8O43823 692 aaKnown RBP13.51□□□□□ -0.25
TPM1-211ENST00000558314 OR2T1O43869 369 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 ARAFP10398 606 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 PRKAR1BP31321 381 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 IDH3AP50213 366 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 AQP5P55064 265 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 RGS8P57771 180 aaPredicted RBP13.51□□□□□ -0.25
TPM1-211ENST00000558314 SCARB2Q14108 478 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 PAGE3Q5JUK9 113 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 FAM69AQ5T7M9 428 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
TPM1-211ENST00000558314 COMTD1Q86VU5 262 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 UEVLDQ8IX04 471 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 C10orf111Q8N326 155 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 SPATA3Q8NHX4 192 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 PROX1Q92786 737 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 ZNF837Q96EG3 531 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms