RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 BAIAP2Q9UQB8 552 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 IFITM5A6NNB3 132 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 H0YC42 278 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 TNFP01375 233 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 AKT2P31751 481 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 PER3P56645 1201 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 LGALSLQ3ZCW2 172 aaPredicted RBP11.76□□□□□ -0.53
LDLR-207ENST00000558013 OR8H3Q8N146 312 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 SYS1Q8N2H4 156 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
LDLR-207ENST00000558013 RLN3Q8WXF3 142 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 OR10A5Q9H207 317 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 HEXA-AS1Q9H8Q6 139 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 ABRACLQ9P1F3 81 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 CAMK2AQ9UQM7 478 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 PCDH15Q96QU1 1955 aa11.76□□□□□ -0.53
LDLR-207ENST00000558013 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 CDC14CA4D256 554 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 RAD1O60671 282 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 SEMA4FO95754 770 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ANXA3P12429 323 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ADRA2CP18825 462 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ACTA2P62736 377 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ACTG2P63267 376 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 LTBQ06643 244 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZNF141Q15928 474 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZBTB37Q5TC79 503 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 SMIM4Q8WVI0 70 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 MMABQ96EY8 250 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 DPCDQ9BVM2 203 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 Q9N2J8 555 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 CYP8B1Q9UNU6 501 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 SERPINA3P01011 423 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 DPP4P27487 766 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 CAMK2DQ13557 499 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 FZD2Q14332 565 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 DPY19L2P2Q6ZN68 376 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 MED25Q71SY5 747 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 OOSP2Q86WS3 158 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 POMGNT2Q8NAT1 580 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZNF680Q8NEM1 530 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ASB12Q8WXK4 309 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ADAMTS14Q8WXS8 1223 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 SEC22CQ9BRL7 303 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 NMNAT2Q9BZQ4 307 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 NRSN2Q9GZP1 204 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 METTL17Q9H7H0 456 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 POLE3Q9NRF9 147 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 PRTFDC1Q9NRG1 225 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 U3KQ87 197 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 CIB4A0PJX0 185 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZNF879B4DU55 563 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 MPC2O95563 127 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 CTSEP14091 401 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 DCTDP32321 178 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 EGR4Q05215 589 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 POU4F3Q15319 338 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 PRAMEF17Q5VTA0 474 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 LIPNQ5VXI9 398 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 Q6ZS52 159 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 ZNF550Q7Z398 422 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 C19orf47Q8N9M1 422 aaKnown RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 KTI12Q96EK9 354 aaPredicted RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 DGAT2Q96PD7 388 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 KCNK15Q9H427 330 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 WDR76Q9H967 626 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 HRASLSQ9HDD0 168 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 STMN3Q9NZ72 180 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 FRRS1LQ9P0K9 344 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 MRM2Q9UI43 246 aaKnown RBP11.75□□□□□ -0.53
LDLR-207ENST00000558013 POMT2Q9UKY4 750 aa11.75□□□□□ -0.53
LDLR-207ENST00000558013 G3V3Q6 166 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 OR7A10O76100 309 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 CFDP00746 253 aaPredicted RBP11.74□□□□□ -0.53
LDLR-207ENST00000558013 THEGLP0DJG4 465 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 RNH1P13489 461 aaKnown RBP11.74□□□□□ -0.53
LDLR-207ENST00000558013 ZNF81P51508 661 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 CCR9P51686 369 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 UNQ9370/PRO34162Q6UXP9 181 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 ELMOD2Q8IZ81 293 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 LSM14AQ8ND56 463 aaKnown RBP11.74□□□□□ -0.53
LDLR-207ENST00000558013 GPR137Q96N19 417 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 S1PR5Q9H228 398 aa11.74□□□□□ -0.53
LDLR-207ENST00000558013 SEMA6CQ9H3T2 930 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms