RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 TRIM64CA6NLI5 447 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 C11orf98E9PRG8 122 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SULT2B1O00204 365 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 PRODHO43272 600 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 RNF13O43567 381 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 PMS2P2O95744 297 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 TXNDC12O95881 172 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 IGHMP01871 453 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 ATP6V1B1P15313 513 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 HIST1H1CP16403 213 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 MAGEA5P43359 124 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 DIO1P49895 249 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 UCNP55089 124 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 GFRA1P56159 465 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 TMPRSS3P57727 454 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 PPIAP62937 165 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 TUBA4AP68366 448 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC35A2P78381 396 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC35A1P78382 337 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 KHDRBS1Q07666 443 aaKnown RBP eCLIP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 PUDPQ08623 228 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 CRMP1Q14194 572 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 EMC4Q5J8M3 183 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF362Q5T0B9 420 aaPredicted RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 GPR139Q6DWJ6 353 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 BORAQ6PGQ7 559 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 IGFL3Q6UXB1 125 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 AHSA2Q719I0 299 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 CXXC5Q7LFL8 322 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC22A16Q86VW1 577 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 FAM109AQ8N4B1 249 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZADH2Q8N4Q0 377 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 FAM98AQ8NCA5 519 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 LSM14AQ8ND56 463 aaKnown RBP13□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 ANKK1Q8NFD2 765 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 OR52E2Q8NGJ4 325 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 SGCDQ92629 289 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 KLHL15Q96M94 604 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 TSPAN32Q96QS1 320 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 RHNO1Q9BSD3 238 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 CCNB1IP1Q9NPC3 277 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 FKBP14Q9NWM8 211 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 B3GALT5Q9Y2C3 310 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 RAXQ9Y2V3 346 aa13□□□□□ -0.33
ARHGEF40-208ENST00000557498 A0A1W2PNV4 684 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 EFCAB10A6NFE3 127 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 SNTNA6NMZ2 147 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 CLCA1A8K7I4 914 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 PTGES3LE9PB15 166 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 MS4A18H0YCH9 400 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 M0R3G1 203 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 MRPS14O60783 128 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 AKR7A3O95154 331 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 CELA3AP09093 270 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 POU3F2P20265 443 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 ACVR2AP27037 513 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 SDHAP31040 664 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 CD97P48960 835 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF91Q05481 1191 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 ITGADQ13349 1161 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF239Q16600 458 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 MS4A18Q3C1V0 323 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 NXNL2Q5VZ03 156 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 NIPAL3Q6P499 406 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 PLBD1Q6P4A8 553 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 GGNQ86UU5 652 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 CPOQ8IVL8 374 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 GID4Q8IVV7 300 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 GGHQ92820 318 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 RASD2Q96D21 266 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 Q96M85 177 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC6A15Q9H2J7 730 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 AMBNQ9NP70 447 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 FANCFQ9NPI8 374 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 CNOT2Q9NZN8 540 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 ERVK-18Q9QC07 812 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 RPL36Q9Y3U8 105 aaKnown RBP12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 PCDHGB7Q9Y5F8 929 aa12.99□□□□□ -0.33
ARHGEF40-208ENST00000557498 A0A0J9YW62 118 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 A0A1W2PRG6 482 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 MKRN2OSH3BPM6 223 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 RGS10O43665 173 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 CLPTM1O96005 669 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 HTR1AP08908 422 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 DBTP11182 482 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 PIPP12273 146 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 PAICSP22234 425 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 AHCYP23526 432 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC15A1P46059 708 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 P2RY4P51582 365 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 CDH11P55287 796 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 CSNK2A1P68400 391 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms