RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 DUX4L6P0CJ89 424 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 DUX4L7P0CJ90 424 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 NPIPA8P0DM63 369 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 NAA10P41227 235 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 PSMD4P55036 377 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 RBMS2Q15434 407 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 NDUFAF6Q330K2 333 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 LINC00303Q3SY05 128 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 TMEM255AQ5JRV8 349 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 MTFR2Q6P444 385 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 ARL14Q8N4G2 192 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 EIF4E3Q8N5X7 224 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 NPEPL1Q8NDH3 523 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 ZCCHC10Q8TBK6 192 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 THRSPQ92748 146 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 HSPA12BQ96MM6 686 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 OR2M4Q96R27 311 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 GPX7Q96SL4 187 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 APOOQ9BUR5 198 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SHARPINQ9H0F6 387 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SRMSQ9H3Y6 488 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 TCF7L1Q9HCS4 588 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 POT1Q9NUX5 634 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 DNAJB12Q9NXW2 375 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 MRPL15Q9P015 296 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 DUX4Q9UBX2 424 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 OR5V1Q9UGF6 321 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 A8MXK9 166 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 TRIM77I1YAP6 450 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 EGFP01133 1207 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 IGF2P01344 180 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 HOXC4P09017 264 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SPI1P17947 270 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 HCCSP53701 268 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 PRPS1P60891 318 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 GMFBP60983 142 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 MGAT2Q10469 447 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 Q499Y3 187 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 ZNF684Q5T5D7 378 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 FAM220AQ7Z4H9 259 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 HSD17B13Q7Z5P4 300 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SFTPA1Q8IWL2 248 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 LMF2Q9BU23 707 aaKnown RBP14.92□□□□□ -0.02
SHMT2-232ENST00000557487 SLC19A3Q9BZV2 496 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 C12orf4Q9NQ89 552 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 KLK11Q9UBX7 282 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 MOKQ9UQ07 419 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 ZNF337Q9Y3M9 751 aa14.92□□□□□ -0.02
SHMT2-232ENST00000557487 EFCAB7A8K855 629 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 SUSD5O60279 629 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 AQP8O94778 261 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 WDPCPO95876 746 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 NGFRP08138 427 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 NMBP08949 121 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 CSF1P09603 554 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 SLC25A1P53007 311 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 TAS2R20P59543 309 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 ENPP2Q13822 863 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 HLXQ14774 488 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-232ENST00000557487 ZNHIT3Q15649 155 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-232ENST00000557487 FAM78AQ5JUQ0 283 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 VITQ6UXI7 678 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 ZNF433Q8N7K0 673 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-232ENST00000557487 SMARCD2Q92925 531 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 KLHL15Q96M94 604 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 ASB16Q96NS5 453 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 MNTQ99583 582 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 CA10Q9NS85 328 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 PCOLCE2Q9UKZ9 415 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 COPS3Q9UNS2 423 aa14.91□□□□□ -0.02
SHMT2-232ENST00000557487 TBC1D3IA0A087WXS9 549 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 HSPB2A8KAH6 182 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 MCIDASD6RGH6 385 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 P2RX6O15547 441 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 FGF17O60258 216 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 TSPAN9O75954 239 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 GLSO94925 669 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 HRGP04196 525 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 ATF4P18848 351 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 CDK2P24941 298 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 AK4P27144 223 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 CFPP27918 469 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 IGFALSP35858 605 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 RPL4P36578 427 aaKnown RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 MAP2K6P52564 334 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 SSBP1Q04837 148 aaKnown RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 CBFBQ13951 182 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 ZNF141Q15928 474 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 HSPB2Q16082 182 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 TMEM81Q6P7N7 255 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 ARSKQ6UWY0 536 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 STAC2Q6ZMT1 411 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 GLB1L2Q8IW92 636 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 DND1Q8IYX4 353 aaKnown RBP14.9□□□□□ -0.02
SHMT2-232ENST00000557487 FLVCR1-AS1Q8TAF5 88 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 ARPC5LQ9BPX5 153 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 SLC17A9Q9BYT1 436 aa14.9□□□□□ -0.02
SHMT2-232ENST00000557487 TTTY10Q9BZA0 68 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms