RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MS4A4EQ96PG1 132 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 OR5B2Q96R09 309 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NAPGQ99747 312 aaPredicted RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 TRMOQ9BU70 441 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 BPESC1Q9GZL8 116 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PCDHAC1Q9H158 963 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 MUC13Q9H3R2 512 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ANKZF1Q9H8Y5 726 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 G6PC2Q9NQR9 355 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 BATF3Q9NR55 127 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF446Q9NWS9 450 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 NTMQ9P121 344 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ICAM5Q9UMF0 924 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 CARD8Q9Y2G2 431 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 UTP11Q9Y3A2 253 aaKnown RBP5.11□□□□□ -1.59
VPS33B-207ENST00000557470 FKBP7Q9Y680 259 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 PMF1-BGLAPU3KQ54 211 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 X6R8D5 127 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 ARFGEF3Q5TH69 2177 aa5.11□□□□□ -1.59
VPS33B-207ENST00000557470 IGKV3D-15A0A087WSY6 115 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 A0A0U1RQK1 487 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 LOC390937A0A1W2PQ73 354 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF320A2RRD8 509 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 LRP5LA4QPB2 252 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 TRIM49D1C9J1S8 452 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 C22orf46C9J442 243 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 TXNL1O43396 289 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 DYSFO75923 2080 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 VENTXO95231 258 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 INHBAP08476 426 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ALOX5P09917 674 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 UBL4AP11441 157 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF23P17027 643 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 IL2RGP31785 369 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 APOBEC3AP31941 199 aaPredicted RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 SRP14P37108 136 aaKnown RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 DIO1P49895 249 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 P2RX1P51575 399 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 PKNOX1P55347 436 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 POU6F2P78424 691 aaPredicted RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 SLC25A3Q00325 362 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 DCTN2Q13561 401 aaKnown RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 QPRTQ15274 297 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 GABRA6Q16445 453 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 KLHL26Q53HC5 615 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF385BQ569K4 471 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ABLIM2Q6H8Q1 611 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 NOXRED1Q6NXP6 359 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 WDR73Q6P4I2 378 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 SLC2A7Q6PXP3 512 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 LRIG3Q6UXM1 1119 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 KRT73Q86Y46 540 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 WDR31Q8NA23 367 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 POMGNT2Q8NAT1 580 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 SPATA4Q8NEY3 305 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 NFKBIDQ8NI38 313 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 CFHR4Q92496 578 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 CDS1Q92903 461 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 VPS33AQ96AX1 596 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 APH1AQ96BI3 265 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 FBXO17Q96EF6 278 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 KTI12Q96EK9 354 aaPredicted RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 Q96M66 194 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 PAFAH2Q99487 392 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 THUMPD3Q9BV44 507 aaKnown RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 BTBD2Q9BX70 525 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 MMADHCQ9H3L0 296 aaPredicted RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 FKRPQ9H9S5 495 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 HEYLQ9NQ87 328 aaPredicted RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 ASB6Q9NWX5 421 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 GIN1Q9NXP7 522 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 TAS2R16Q9NYV7 291 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 NINJ2Q9NZG7 142 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 EMC3Q9P0I2 261 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 MALT1Q9UDY8 824 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 WBP11Q9Y2W2 641 aaKnown RBP5.1□□□□□ -1.59
VPS33B-207ENST00000557470 CCL27Q9Y4X3 112 aa5.1□□□□□ -1.59
VPS33B-207ENST00000557470 CCDC151A5D8V7 595 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ZNF716A6NP11 495 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 NPIPB8E9PQR5 432 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 NPIPB9F8W1W9 429 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SULT2B1O00204 365 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TSPAN4O14817 238 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ADAM20O43506 726 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SEC22BO75396 215 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 RSL1D1O76021 490 aaKnown RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 TAC1P20366 129 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 EFNA1P20827 205 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 IMPDH1P20839 514 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ATP6V1C1P21283 382 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 PHBP35232 272 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 FRKP42685 505 aaPredicted RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SERPINB9P50453 376 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 CCR4P51679 360 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 PCBP3P57721 371 aaKnown RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 SNRPD2P62316 118 aaKnown RBP5.09□□□□□ -1.59
VPS33B-207ENST00000557470 ACTG1P63261 375 aa5.09□□□□□ -1.59
VPS33B-207ENST00000557470 IMPG1Q17R60 797 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms