RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 UCKL1Q9NWZ5 548 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 NUBP2Q9Y5Y2 271 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 OR7A10O76100 309 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 H2AFB2P0C5Z0 115 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 GPR143P51810 404 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 KLF9Q13886 244 aaPredicted RBP16.17■□□□□ 0.18
XRCC3-218ENST00000557439 DPY19L2P2Q6ZN68 376 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 OR8K3Q8NH51 312 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 TOE1Q96GM8 510 aaKnown RBP16.17■□□□□ 0.18
XRCC3-218ENST00000557439 CDCA3Q99618 268 aaPredicted RBP16.17■□□□□ 0.18
XRCC3-218ENST00000557439 ABRACLQ9P1F3 81 aa16.17■□□□□ 0.18
XRCC3-218ENST00000557439 THADAQ6YHU6 1953 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 FCER2P06734 321 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 TMIGD3P0DMS9 266 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-218ENST00000557439 MST1P26927 711 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 UQCRC1P31930 480 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 GGTLC2Q14390 218 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 KCNAB1Q14722 419 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 MANEAQ5SRI9 462 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 MED25Q71SY5 747 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 PHOSPHO1Q8TCT1 267 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 MRPL38Q96DV4 380 aaKnown RBP16.16■□□□□ 0.18
XRCC3-218ENST00000557439 PCNX3Q9H6A9 2034 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 LIN7BQ9HAP6 207 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 CDC14CA4D256 554 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 ELOA3DA6NLF2 546 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-218ENST00000557439 CTNSO60931 367 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 LTBQ06643 244 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 PRTGQ2VWP7 1150 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 ELOA3BQ3SY89 546 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 SLITRK4Q8IW52 837 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 LSM14AQ8ND56 463 aaKnown RBP16.16■□□□□ 0.18
XRCC3-218ENST00000557439 ELOA3Q8NG57 546 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 OR10AC1Q8NH08 325 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 RTN4RQ9BZR6 473 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 CAMK2AQ9UQM7 478 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 ZNF337Q9Y3M9 751 aa16.16■□□□□ 0.18
XRCC3-218ENST00000557439 KIR2DS5A0A0G2JLQ3 304 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 A0A0G2JNG1 304 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 SPTY2D1-AS1A0A0U1RR47 76 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 KIR2DS3K7RE56 304 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 SSNA1O43805 119 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 PRAMEF2O60811 474 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 RABIFP47224 123 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 GFERP55789 205 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 CTXN1P60606 82 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZP1P60852 638 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 LGALS3BPQ08380 585 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 KIR2DS5Q14953 304 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZNF527Q8NB42 609 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZSCAN1Q8NBB4 408 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 NMNAT2Q9BZQ4 307 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 NRSN2Q9GZP1 204 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 OR10A4Q9H209 315 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZCCHC4Q9H5U6 513 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 RP1P56715 2156 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZNF879B4DU55 563 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 CLPSP04118 112 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 SELENOPP49908 381 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 PRAMEF17Q5VTA0 474 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 CREB3L2Q70SY1 520 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.15■□□□□ 0.18
XRCC3-218ENST00000557439 SMIM4Q8WVI0 70 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 PMM1Q92871 262 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 LRRC61Q9BV99 259 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ULBP3Q9BZM4 244 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 SYNDIG1Q9H7V2 258 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ING4Q9UNL4 249 aa16.15■□□□□ 0.18
XRCC3-218ENST00000557439 ASXL3Q9C0F0 2248 aa16.14■□□□□ 0.18
XRCC3-218ENST00000557439 IFITM5A6NNB3 132 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 GPR171O14626 319 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 ANXA3P12429 323 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 VEGFCP49767 419 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 EGR4Q05215 589 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 UBE2NLQ5JXB2 153 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 Q6ZTK2 550 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 OVCH1Q7RTY7 1134 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 ZNF615Q8N8J6 731 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 OR51A4Q8NGJ6 313 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 KTI12Q96EK9 354 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 G6PC3Q9BUM1 346 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 SPRTNQ9H040 489 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 C20orf85Q9H1P6 137 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 PNO1Q9NRX1 252 aaKnown RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 STMN3Q9NZ72 180 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 H0YC42 278 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 ADRA2CP18825 462 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 RPS4XP62701 263 aaKnown RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 PITPNAQ00169 270 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 CAMK2BQ13554 666 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 UNQ9370/PRO34162Q6UXP9 181 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-218ENST00000557439 OR2T4Q8NH00 348 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 ADAMTS14Q8WXS8 1223 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 SEMA4CQ9C0C4 833 aa16.14■□□□□ 0.17
XRCC3-218ENST00000557439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.14■□□□□ 0.178e-6■■■■□ 20.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms