RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 C1orf140Q5VVS0 124 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
SNX6-209ENST00000557265 LRRC74BQ6ZQY2 392 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 MDP1Q86V88 176 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 ZNF440Q8IYI8 595 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 PPP1R36Q96LQ0 422 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 LRRC37BQ96QE4 947 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 MRPL37Q9BZE1 423 aaKnown RBP10.6□□□□□ -0.71
SNX6-209ENST00000557265 RACGAP1Q9H0H5 632 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 AKTIPQ9H8T0 292 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 NOX3Q9HBY0 568 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 MKS1Q9NXB0 559 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 REV1Q9UBZ9 1251 aa10.6□□□□□ -0.71
SNX6-209ENST00000557265 TLDC2A0PJX2 215 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 WNT9BO14905 357 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SYNGR3O43761 229 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SLC43A1O75387 559 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SPAG7O75391 227 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 HPXP02790 462 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 TFPTP0C1Z6 253 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SAGP10523 405 aaPredicted RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 RPS4Y1P22090 263 aaKnown RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 NR4A1P22736 598 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 ACAA2P42765 397 aaKnown RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 CAPZA2P47755 286 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 CLDN17P56750 224 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 COPZ1P61923 177 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 POU3F1Q03052 451 aaPredicted RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 CASP8Q14790 479 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 MSMPQ1L6U9 139 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SPANXN4Q5MJ08 99 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 WBP2NLQ6ICG8 309 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 IL17RDQ8NFM7 739 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 OR51F2Q8NH61 342 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 RDH5Q92781 318 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 TESCQ96BS2 214 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 SLC25A36Q96CQ1 311 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 RBM4Q9BWF3 364 aaKnown RBP10.59□□□□□ -0.71
SNX6-209ENST00000557265 GPR35Q9HC97 309 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 USP22Q9UPT9 525 aa10.59□□□□□ -0.71
SNX6-209ENST00000557265 CDHR4A6H8M9 788 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 M0R233 179 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 NPIPB7O75200 414 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 ZNF432O94892 652 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 TFP02787 698 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 GAAP10253 952 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 NR2F1P10589 423 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 CREB1P16220 341 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 ZNF43P17038 809 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 ALDH3B1P43353 468 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 EVX1P49640 407 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 SEC24CP53992 1094 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 SLC9B1Q4ZJI4 515 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
SNX6-209ENST00000557265 USP43Q70EL4 1123 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 VRK2Q86Y07 508 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 PEX5LQ8IYB4 626 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
SNX6-209ENST00000557265 SYT3Q9BQG1 590 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 MS4A5Q9H3V2 200 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 PRDM4Q9UKN5 801 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 RCE1Q9Y256 329 aa10.58□□□□□ -0.72
SNX6-209ENST00000557265 DYSFO75923 2080 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 LOC105371242A0A075B767 164 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 CCDC154A6NI56 674 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 FTCDNL1E5RQL4 147 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
SNX6-209ENST00000557265 SEC14L2O76054 403 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 AHSA1O95433 338 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 PNPP00491 289 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 HLA-HP01893 362 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 BPGMP07738 259 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 NUDT17P0C025 328 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 PNMTP11086 282 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 PRG2P13727 222 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 NCF2P19878 526 aaPredicted RBP10.57□□□□□ -0.72
SNX6-209ENST00000557265 EPHA1P21709 976 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 ACHEP22303 614 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 S100A3P33764 101 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 ANXA11P50995 505 aaKnown RBP10.57□□□□□ -0.72
SNX6-209ENST00000557265 ARFIP2P53365 341 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 TMEM33P57088 247 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 LMO4P61968 165 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 C1DQ13901 141 aaKnown RBP10.57□□□□□ -0.72
SNX6-209ENST00000557265 LIN52Q52LA3 116 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 COX20Q5RI15 118 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 ATG16L1Q676U5 607 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 ZNF836Q6ZNA1 936 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 CCDC36Q8IYA8 594 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 TRIML2Q8N7C3 387 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 OR52P1PQ8NH57 321 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 MFSD8Q8NHS3 518 aa10.57□□□□□ -0.72
SNX6-209ENST00000557265 KIF18AQ8NI77 898 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms