RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 OXGR1Q96P68 337 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 PTDSS2Q9BVG9 487 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 C12orf10Q9HB07 376 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 MOV10Q9HCE1 1003 aaKnown RBP13.84□□□□□ -0.19
TUBB3-213ENST00000557262 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 CRNNQ9UBG3 495 aaPredicted RBP13.84□□□□□ -0.19
TUBB3-213ENST00000557262 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 USH1CQ9Y6N9 552 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 FBN3Q75N90 2809 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 CUBNO60494 3623 aa13.84□□□□□ -0.19
TUBB3-213ENST00000557262 MXRA5Q9NR99 2828 aa13.83□□□□□ -0.19
TUBB3-213ENST00000557262 A0A096LPE4 126 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 A0A1W2PPZ6 126 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 NR5A2O00482 541 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 LY6HO94772 140 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 ZNF432O94892 652 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 GTF2E2P29084 291 aaKnown RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 MRPL19P49406 292 aaKnown RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 PDLIM4P50479 330 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 SH3BGRP55822 239 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 ROR2Q01974 943 aaKnown RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 C5orf46Q6UWT4 87 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 C6orf89Q6UWU4 347 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 NET1Q7Z628 596 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 FAM169BQ8N8A8 192 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 LSMEM1Q8N8F7 131 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 ALKBH3Q96Q83 286 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-213ENST00000557262 CA10Q9NS85 328 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 RCE1Q9Y256 329 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 FKBP7Q9Y680 259 aa13.83□□□□□ -0.2
TUBB3-213ENST00000557262 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 B9A039 149 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 NDUFS8O00217 210 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 FZD7O75084 574 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 SLC43A1O75387 559 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 TGDSO95455 350 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 FAM157CP0CG43 387 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 HOXB9P17482 250 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 PRKAR1BP31321 381 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 STX1BP61266 288 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 SNRPD2P62316 118 aaKnown RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 ARF1P84077 181 aaKnown RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 NAAAQ02083 359 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 C1DQ13901 141 aaKnown RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 FAM69AQ5T7M9 428 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 OR4F15Q8NGB8 312 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 DNAJA4Q8WW22 397 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 SLC38A4Q969I6 547 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 TAAR8Q969N4 342 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 SORCS2Q96PQ0 1159 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 VRK1Q99986 396 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 RSPO3Q9BXY4 272 aaPredicted RBP13.82□□□□□ -0.2
TUBB3-213ENST00000557262 BEX2Q9BXY8 128 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 NELFAQ9H3P2 528 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 SLC25A37Q9NYZ2 338 aa13.82□□□□□ -0.2
TUBB3-213ENST00000557262 LOC102725191A0A1B0GVB3 256 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 VSTM5A8MXK1 200 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 VWC2LB2RUY7 222 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 AIM2O14862 343 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 ERLIN1O75477 346 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 PDE5AO76074 875 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 IGLV1-44P01699 117 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 OR4A8P0C604 315 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 CECR9P0C854 216 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 IGHV4-31P0DP07 118 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 CBR1P16152 277 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TUBA1BP68363 451 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TUBA4AP68366 448 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 LRIF1Q5T3J3 769 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TUBA1AQ71U36 451 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 H1FNTQ75WM6 255 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-213ENST00000557262 SLC46A3Q7Z3Q1 461 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 FUNDC1Q8IVP5 155 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 GPR137CQ8N3F9 429 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 NFKBIDQ8NI38 313 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TMEM158Q8WZ71 300 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 SPATA5L1Q9BVQ7 753 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 REPIN1Q9BWE0 567 aaKnown RBP13.81□□□□□ -0.2
TUBB3-213ENST00000557262 GPR35Q9HC97 309 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 MYOZ1Q9NP98 299 aaPredicted RBP13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TCF7L2Q9NQB0 619 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 SLAMF8Q9P0V8 285 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 B3GAT1Q9P2W7 334 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 LPAR3Q9UBY5 353 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
TUBB3-213ENST00000557262 TRAV36DV7A0A075B6V5 113 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 A0A1B0GWA3 101 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 LOC390937A0A1W2PQ73 354 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 M0R082 166 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
TUBB3-213ENST00000557262 LMX1BO60663 402 aa13.8□□□□□ -0.2
TUBB3-213ENST00000557262 IGKV3-15P01624 115 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms