RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GRINAQ7Z429 371 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 SNX33Q8WV41 574 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 PHF21AQ96BD5 680 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 FAM120BQ96EK7 910 aaKnown RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 MARS2Q96GW9 593 aaKnown RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 SF3B5Q9BWJ5 86 aaKnown RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 IQCGQ9H095 443 aaKnown RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 NPHS2Q9NP85 383 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 SIRT5Q9NXA8 310 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 GAR1Q9NY12 217 aaKnown RBP10.54□□□□□ -0.72
PSEN1-220ENST00000557037 TMCO1Q9UM00 188 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 TMED7Q9Y3B3 224 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
PSEN1-220ENST00000557037 K7EIL1 84 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 AKAP10O43572 662 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 GPR137BO60478 399 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 MELTFP08582 738 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 SBK2P0C263 348 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 GLO1Q04760 184 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 CLCQ05315 142 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 CEACAM7Q14002 265 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 OR7A5Q15622 319 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 GPRIN3Q6ZVF9 776 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 CREB3L2Q70SY1 520 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 CCDC91Q7Z6B0 441 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 MGARPQ8TDB4 240 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 ADAMTS15Q8TE58 950 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 DDIT4LQ96D03 193 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 KCNA7Q96RP8 456 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 DCLRE1CQ96SD1 692 aaKnown RBP10.53□□□□□ -0.72
PSEN1-220ENST00000557037 FN3KRPQ9HA64 309 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 SAP30LQ9HAJ7 183 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 NKIRAS2Q9NYR9 191 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 EGFL7Q9UHF1 273 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 DSPPQ9NZW4 1301 aa10.53□□□□□ -0.72
PSEN1-220ENST00000557037 HMX2A2RU54 273 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 FAM187AA6NFU0 413 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 RBP1P09455 135 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 FAM157BP0CG42 384 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 ZNF14P17017 642 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-220ENST00000557037 FKBP2P26885 142 aaKnown RBP10.52□□□□□ -0.73
PSEN1-220ENST00000557037 LCP2Q13094 533 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 TP53BP2Q13625 1128 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 CEACAM16Q2WEN9 425 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 PRAMEF8Q5VWM4 474 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 PRAMEF7Q5VXH5 474 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 TMEM225Q6GV28 225 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 RGS7BPQ6MZT1 257 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-220ENST00000557037 NOXRED1Q6NXP6 359 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 Q6ZSV7 163 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 EIF3MQ7L2H7 374 aaKnown RBP10.52□□□□□ -0.73
PSEN1-220ENST00000557037 EPHX4Q8IUS5 362 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 TMEM86BQ8N661 226 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 UPRTQ96BW1 309 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 PPCDCQ96CD2 204 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 ELMOD3Q96FG2 381 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 ACTRT3Q9BYD9 372 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 OR51B6Q9H340 312 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 GPR35Q9HC97 309 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 NOX4Q9NPH5 578 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 B3GNT2Q9NY97 397 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 SH3BP4Q9P0V3 963 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 OR5V1Q9UGF6 321 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 GPR160Q9UJ42 338 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 PCDHGB4Q9UN71 923 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 POLR3KQ9Y2Y1 108 aaPredicted RBP10.52□□□□□ -0.73
PSEN1-220ENST00000557037 PCDHGB5Q9Y5G0 923 aa10.52□□□□□ -0.73
PSEN1-220ENST00000557037 LIPT2A6NK58 231 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 A8MT66 165 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 SCN2BO60939 215 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 URI1O94763 535 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-220ENST00000557037 SLC6A9P48067 706 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 PTDSS1P48651 473 aaKnown RBP10.51□□□□□ -0.73
PSEN1-220ENST00000557037 IDH2P48735 452 aaKnown RBP10.51□□□□□ -0.73
PSEN1-220ENST00000557037 KLF3P57682 345 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-220ENST00000557037 SELENOVP59797 346 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 EGR3Q06889 387 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 CD69Q07108 199 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 ZNF141Q15928 474 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 GSG1Q2KHT4 349 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 FOXB2Q5VYV0 432 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 EMBQ6PCB8 327 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 KLHL7Q8IXQ5 586 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 CMIPQ8IY22 773 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 C1orf174Q8IYL3 243 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 C11orf44Q8N8P7 122 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 DYRK2Q92630 601 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 LINC00470Q9BZP3 86 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 TOR3AQ9H497 397 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 PIF1Q9H611 641 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 ADPRHL2Q9NX46 363 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 OSGIN1Q9UJX0 560 aa10.51□□□□□ -0.73
PSEN1-220ENST00000557037 FAF1Q9UNN5 650 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms