RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 EGR4Q05215 589 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 KEAP1Q14145 624 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 TSC22D1Q15714 1073 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 H1FNTQ75WM6 255 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-207ENST00000556831 P3H2Q8IVL5 708 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 SLC15A3Q8IY34 581 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 POMGNT2Q8NAT1 580 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 OR6S1Q8NH40 331 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 ZNF417Q8TAU3 575 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 TAAR8Q969N4 342 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 ZNF587Q96SQ5 575 aaPredicted RBP12.46□□□□□ -0.41
SLIRP-207ENST00000556831 PTDSS2Q9BVG9 487 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 ESRP2Q9H6T0 727 aaKnown RBP12.46□□□□□ -0.41
SLIRP-207ENST00000556831 MALT1Q9UDY8 824 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 USP22Q9UPT9 525 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 NBEAL1Q6ZS30 2694 aa12.46□□□□□ -0.41
SLIRP-207ENST00000556831 FAM221AA4D161 298 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-207ENST00000556831 NME4O00746 187 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 RAD51DO75771 328 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 DNAJC8O75937 253 aaPredicted RBP12.45□□□□□ -0.42
SLIRP-207ENST00000556831 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 UMPSP11172 480 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 COX5AP20674 150 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 GSK3BP49841 420 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 PMS2P3Q13401 168 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 NPTX1Q15818 432 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 OR7E24Q6IFN5 339 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 NIPAL3Q6P499 406 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 FKBP9P1Q75LS8 142 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 P2RY8Q86VZ1 359 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
SLIRP-207ENST00000556831 SCAIQ8N9R8 606 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 ADPRHL1Q8NDY3 354 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 NINJ1Q92982 152 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 PCDHAC1Q9H158 963 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 TAGLN3Q9UI15 199 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 ST6GALNAC2Q9UJ37 374 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
SLIRP-207ENST00000556831 IGKV1D-42A0A075B6H8 117 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.44□□□□□ -0.42
SLIRP-207ENST00000556831 FTCDNL1E5RQL4 147 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF587BE7ETH6 402 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 SIAH2O43255 324 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 TPST2O60704 377 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 OR5F1O95221 314 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 RAF1P04049 648 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 IFNW1P05000 195 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 TNFRSF1BP20333 461 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 IGHV1-2P23083 117 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 OR1E2P47887 323 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 SELENOWP63302 87 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 PPA1Q15181 289 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 TAB1Q15750 504 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 TIMM23BQ5SRD1 257 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 CREB3L2Q70SY1 520 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 PIGWQ7Z7B1 504 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 UEVLDQ8IX04 471 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 GEMIN6Q8WXD5 167 aaKnown RBP12.44□□□□□ -0.42
SLIRP-207ENST00000556831 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF385AQ96PM9 386 aaKnown RBP12.44□□□□□ -0.42
SLIRP-207ENST00000556831 WFDC6Q9BQY6 131 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 RPS6KA6Q9UK32 745 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 RCE1Q9Y256 329 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 PLEKHA6Q9Y2H5 1048 aa12.44□□□□□ -0.42
SLIRP-207ENST00000556831 ABCA4P78363 2273 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 DEFB108AA8MXU0 73 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 SLC43A1O75387 559 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 ATP5HO75947 161 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 THBDP07204 575 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 THRBP10828 461 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 AHCYP23526 432 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 CRYBA2P53672 197 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 CLDN17P56750 224 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 PUDPQ08623 228 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 IFI44LQ53G44 452 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 C9orf135Q5VTT2 229 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 HMBOX1Q6NT76 420 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 NANOGNBQ7Z5D8 188 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 CYP4Z1Q86W10 505 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 KDM8Q8N371 416 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-207ENST00000556831 OR4D11Q8NGI4 311 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 NANSQ9NR45 359 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 SLC7A10Q9NS82 523 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 ABCD2Q9UBJ2 740 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms