RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TRIM15Q9C019 465 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 KAT8Q9H7Z6 458 aaKnown RBP9.09□□□□□ -0.95
SHMT2-224ENST00000556737 C12orf10Q9HB07 376 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 SLC7A10Q9NS82 523 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 TAS2R16Q9NYV7 291 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
SHMT2-224ENST00000556737 ABCD2Q9UBJ2 740 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 SEC14L4Q9UDX3 406 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 TESQ9UGI8 421 aaKnown RBP9.09□□□□□ -0.95
SHMT2-224ENST00000556737 EGFL7Q9UHF1 273 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 SLC7A8Q9UHI5 535 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 RNF115Q9Y4L5 304 aa9.09□□□□□ -0.95
SHMT2-224ENST00000556737 ROS1P08922 2347 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 A0A0B4J2E0 115 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 A0A1B0GX12 115 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 FAM220BPB1ANY3 271 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 SMPD2O60906 423 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 MRPL33O75394 65 aaKnown RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 AHSA1O95433 338 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 OPN1SWP03999 348 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 PNMTP11086 282 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 PAX1P15863 534 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 CRYBA2P53672 197 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 NKX6-1P78426 367 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 RBBP4Q09028 425 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 FAPQ12884 760 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 KPNB1Q14974 876 aaKnown RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 NPTX1Q15818 432 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 GABRA6Q16445 453 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 SPATS1Q496A3 300 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 CYP2R1Q6VVX0 501 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 SPATA24Q86W54 205 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ARMC8Q8IUR7 673 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 UBE2J2Q8N2K1 259 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 C11orf65Q8NCR3 313 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 BHLHE22Q8NFJ8 381 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 AKAP1Q92667 903 aaKnown RBP eCLIP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 FAM162AQ96A26 154 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 KTI12Q96EK9 354 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 RSRC1Q96IZ7 334 aaKnown RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 TAPBPLQ9BX59 468 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 GSX2Q9BZM3 304 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 PCDHAC1Q9H158 963 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ESRP2Q9H6T0 727 aaKnown RBP9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ASB6Q9NWX5 421 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ADPRHL2Q9NX46 363 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 B3GAT1Q9P2W7 334 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 USP22Q9UPT9 525 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 POMPQ9Y244 141 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ANGPT4Q9Y264 503 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 SLC25A15Q9Y619 301 aa9.08□□□□□ -0.96
SHMT2-224ENST00000556737 ELOVL7A1L3X0 281 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ELOA3DA6NLF2 546 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SHISA9B4DS77 424 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 CLOCKO15516 846 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 CD3EP07766 207 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 DANCRP0C864 163 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 HSD17B1P14061 328 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 NCK1P16333 377 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 CD247P20963 164 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 PCGF2P35227 344 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 RPS5P46782 204 aaKnown RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 PTH2RP49190 550 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 RGS8P57771 180 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ELF3P78545 371 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 LGALS3BPQ08380 585 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SPOCK1Q08629 439 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 TRIM25Q14258 630 aaKnown RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 NRF1Q16656 503 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ELOA3BQ3SY89 546 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF672Q499Z4 452 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ALG10BQ5I7T1 473 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 C9orf135Q5VTT2 229 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SHEQ5VZ18 495 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 PGM2L1Q6PCE3 622 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 CREB3L2Q70SY1 520 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 LINGO2Q7L985 606 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 GPAT4Q86UL3 456 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 TSPYL5Q86VY4 417 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-224ENST00000556737 P2RY8Q86VZ1 359 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 DHFR2Q86XF0 187 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 EPHX4Q8IUS5 362 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 P3H2Q8IVL5 708 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 MICU2Q8IYU8 434 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 WDR31Q8NA23 367 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ELOA3Q8NG57 546 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 OR4D11Q8NGI4 311 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 OR52N5Q8NH56 324 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 TAMM41Q96BW9 452 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ASB9Q96DX5 294 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 PERPQ96FX8 193 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 MUS81Q96NY9 551 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ZNF607Q96SK3 696 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 ARHGDIGQ99819 225 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 SLCO5A1Q9H2Y9 848 aa9.07□□□□□ -0.96
SHMT2-224ENST00000556737 MUC13Q9H3R2 512 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms