RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CCDC153Q494R4 210 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 AVPI1Q5T686 147 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 IL23RQ5VWK5 629 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 FRRS1Q6ZNA5 592 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 RNF165Q6ZSG1 346 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-219ENST00000556432 GPR137CQ8N3F9 429 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 FNDC5Q8NAU1 212 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 OR4A15Q8NGL6 344 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 AGR3Q8TD06 166 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF503-AS2A6NEH8 195 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 CFAP73A6NFT4 308 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 J3QLI3 93 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 CDC14BO60729 498 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 NCR1O76036 304 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 VAMP5O95183 116 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 ABHD2P08910 425 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 NAT2P11245 290 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 CLDN17P56750 224 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
ACTN1-219ENST00000556432 GALK2Q01415 458 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 PLAURQ03405 335 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 BNIP2Q12982 314 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 MSMPQ1L6U9 139 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 TRMT5Q32P41 509 aaKnown RBP11.95□□□□□ -0.5
ACTN1-219ENST00000556432 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF771Q7L3S4 317 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-219ENST00000556432 SIGLECL1Q8N7X8 197 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 LINC00470Q9BZP3 86 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 C7orf69Q9H7B7 122 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 DUSP13Q9UII6 198 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 RASD1Q9Y272 281 aa11.95□□□□□ -0.5
ACTN1-219ENST00000556432 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 TMEM229AB2RXF0 380 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 SLC43A1O75387 559 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF432O94892 652 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 NUDT17P0C025 328 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CD79AP11912 226 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CCT5P48643 541 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 MRPS11P82912 194 aaKnown RBP11.94□□□□□ -0.5
ACTN1-219ENST00000556432 FUT5Q11128 374 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 GNA13Q14344 377 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CEACAM16Q2WEN9 425 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 ALKBH6Q3KRA9 238 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 OR4F3Q6IEY1 312 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 SYT10Q6XYQ8 523 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 ZCCHC23Q6ZST2 131 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 EPHX4Q8IUS5 362 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 C10orf107Q8IVU9 208 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CMIPQ8IY22 773 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CCDC36Q8IYA8 594 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 CADM2Q8N3J6 435 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 MIPOL1Q8TD10 442 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 GPR35Q9HC97 309 aa11.94□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF346Q9UL40 294 aaKnown RBP11.94□□□□□ -0.5
ACTN1-219ENST00000556432 FRS3O43559 492 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 RP2O75695 350 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 CPSF4O95639 269 aaKnown RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 HLA-HP01893 362 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 CHRNGP07510 517 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 GUSBP08236 651 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 ZNF43P17038 809 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 GTF2E2P29084 291 aaKnown RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 CHI3L1P36222 383 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 RAD52P43351 418 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 IL13RA1P78552 427 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 EPS8Q12929 822 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 C1DQ13901 141 aaKnown RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 NKPD1Q17RQ9 610 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 MRPL2Q5T653 305 aaKnown RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 C1orf140Q5VVS0 124 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 TREML1Q86YW5 311 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 RIMKLAQ8IXN7 391 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 KDM8Q8N371 416 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 SLC25A36Q96CQ1 311 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 GATA5Q9BWX5 397 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 DPY30Q9C005 99 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 MED29Q9NX70 200 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 MYEF2Q9P2K5 600 aaKnown RBP11.93□□□□□ -0.5
ACTN1-219ENST00000556432 ZDHHC2Q9UIJ5 367 aa11.93□□□□□ -0.5
ACTN1-219ENST00000556432 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 A8MVM7 634 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 FAAHO00519 579 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 AHSA1O95433 338 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 IL7RP16871 459 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 PRTN3P24158 256 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 ECHS1P30084 290 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 LSP1P33241 339 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 GLRXP35754 106 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 P2RY4P51582 365 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 COPZ1P61923 177 aa11.92□□□□□ -0.5
ACTN1-219ENST00000556432 PIGFQ07326 219 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms