RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KATNB1Q9BVA0 655 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 ALG8Q9BVK2 526 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 GTPBP2Q9BX10 602 aaKnown RBP4.04□□□□□ -1.76
ATXN3-241ENST00000556374 BEX2Q9BXY8 128 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF717Q9BY31 904 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-241ENST00000556374 MIXL1Q9H2W2 232 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 PIGUQ9H490 435 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 RXFP3Q9NSD7 469 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 CNIH4Q9P003 139 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 COPZ2Q9P299 210 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 PLEKHB1Q9UF11 243 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF222Q9UK12 451 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 NDRG2Q9UN36 371 aaKnown RBP4.04□□□□□ -1.76
ATXN3-241ENST00000556374 BAIAP2Q9UQB8 552 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 CARD8Q9Y2G2 431 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 GPR52Q9Y2T5 361 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM98Q9Y2Y6 226 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 YARS2Q9Y2Z4 477 aaKnown RBP4.04□□□□□ -1.76
ATXN3-241ENST00000556374 MED31Q9Y3C7 131 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 PRKAB1Q9Y478 270 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 NUBP2Q9Y5Y2 271 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 COLEC10Q9Y6Z7 277 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 COL4A2P08572 1712 aa4.04□□□□□ -1.76
ATXN3-241ENST00000556374 ANKRD17O75179 2603 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 APC2O95996 2303 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TBC1D3KA0A087X1G2 549 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LRIT2A6NDA9 550 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TBC1D3BA6NDS4 549 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TBC1D3FA6NER0 549 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 GLOD5A6NK44 160 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 WASHC1A8K0Z3 465 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 C12orf71A8MTZ7 269 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF879B4DU55 563 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LRRN3E7EW58 273 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 GTPBP1O00178 669 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 BTN3A3O00478 584 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 PDCD5O14737 125 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SEC14L5O43304 696 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 REM1O75628 298 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 APODP05090 189 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 POU2F2P09086 479 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 IFI30P13284 250 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LAMP2P13473 410 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 PLA2G2AP14555 144 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ATP5A1P25705 553 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CERS1P27544 350 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SLC6A6P31641 620 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OMPP47874 163 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 PITPNBP48739 271 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 EVX1P49640 407 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 NOVA1P51513 510 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 GBX2P52951 348 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 STARD6P59095 220 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 BTN3A2P78410 334 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 PRDX1Q06830 199 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LGALS3BPQ08380 585 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF155Q12901 538 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 IRF4Q15306 451 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ZNHIT3Q15649 155 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CLPPQ16740 277 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 COL28A1Q2UY09 1125 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 YIF1BQ5BJH7 314 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CEP78Q5JTW2 689 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 AADACL4Q5VUY2 407 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF776Q68DI1 518 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TBC1D3GQ6DHY5 549 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ACSM5Q6NUN0 579 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 NIPAL3Q6P499 406 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CD200R1LQ6Q8B3 271 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TSSK4Q6SA08 328 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 SMARCD3Q6STE5 483 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ARL9Q6T311 187 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CREB3L2Q70SY1 520 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ABHD13Q7L211 337 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 KRT74Q7RTS7 529 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 FAM220AQ7Z4H9 259 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 BCDIN3DQ7Z5W3 292 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ASPGQ86U10 573 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 VRK2Q86Y07 508 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 CCDC28AQ8IWP9 274 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 NRMQ8IXM6 262 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 RNF113BQ8IZP6 322 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 UBE2J2Q8N2K1 259 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 FAM109AQ8N4B1 249 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TOMM5Q8N4H5 51 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 C12orf76Q8N812 135 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 YIPF7Q8N8F6 280 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 COX18Q8N8Q8 333 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ACOT4Q8N9L9 421 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 LMNTD1Q8N9Z9 388 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 DUSP18Q8NEJ0 188 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR7G1Q8NGA0 311 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR4K14Q8NGD5 310 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR8D4Q8NGM9 314 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR9A2Q8NGT5 310 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR4Q3Q8NH05 313 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 OR4C6Q8NH72 309 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF671Q8TAW3 534 aa4.03□□□□□ -1.76
ATXN3-241ENST00000556374 TRMT10AQ8TBZ6 339 aaKnown RBP4.03□□□□□ -1.76
ATXN3-241ENST00000556374 BRIX1Q8TDN6 353 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms