RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SLC46A3Q7Z3Q1 461 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 SLC22A16Q86VW1 577 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 CISD2Q8N5K1 135 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 FADS6Q8N9I5 356 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 RDH12Q96NR8 316 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 NDRG4Q9ULP0 352 aaKnown RBP9.18□□□□□ -0.94
NEK9-205ENST00000555405 ROS1P08922 2347 aa9.18□□□□□ -0.94
NEK9-205ENST00000555405 RIIAD1A6NNX1 92 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 ZAR1LA6NP61 321 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 IGHV3-9P01782 118 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 HIST1H1CP16403 213 aaKnown RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 PCYT1AP49585 367 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 CLDN15P56746 228 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 CARD18P57730 90 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 FXYD6P3P58550 94 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 ISL1P61371 349 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 FOXK2Q01167 660 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 MAD2L1BPQ15013 274 aaPredicted RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 TBR1Q16650 682 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 HBMQ6B0K9 141 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 LEG1Q6P5S2 330 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 DND1Q8IYX4 353 aaKnown RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 STX19Q8N4C7 294 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TEX19Q8NA77 164 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 OR5J2Q8NH18 312 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TMEM41AQ96HV5 264 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TXNDC15Q96J42 360 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 ZNF226Q9NYT6 803 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 COMMD3-BMI1R4GMX3 469 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 PNMA8CA0A1B0GUJ8 204 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 SH3D21A4FU49 640 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 H0YJX3 145 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TAF4O00268 1085 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 XKRYO14609 159 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 NME2P1O60361 137 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 NME2P22392 152 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 PYCR1P32322 319 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 TMPRSS3P57727 454 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 CAMK2DQ13557 499 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 NADK2Q4G0N4 442 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 MARVELD2Q8N4S9 558 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 LSM14AQ8ND56 463 aaKnown RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 TMEM43Q9BTV4 400 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 FAM117AQ9C073 453 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 POLR2J2Q9GZM3 115 aaKnown RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 SH2D2AQ9NP31 389 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 RPRD1BQ9NQG5 326 aaKnown RBP9.17□□□□□ -0.94
NEK9-205ENST00000555405 IL20Q9NYY1 176 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
NEK9-205ENST00000555405 K7ENP7 123 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 SLC16A6O15403 523 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 BCL10O95999 233 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 IFNGR1P15260 489 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ACVR2AP27037 513 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ACVR1BP36896 505 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 SUCLG1P53597 346 aaKnown RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 SELENBP1Q13228 472 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 INO80CQ6PI98 192 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 UGT2A3Q6UWM9 527 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 GTPBP8Q8N3Z3 284 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 MDS2Q8NDY4 140 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 SLC35B4Q969S0 331 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 KLHL15Q96M94 604 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 EVA1AQ9H8M9 152 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 INIPQ9NRY2 104 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 TRGV5A0A0B4J1U4 118 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 MAGEA13PA6NCF6 341 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ANKRD33BA6NCL7 494 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 PRR23D1E9PI22 279 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 GPANK1O95872 356 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 HSMCR30P0CW71 290 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 PRR23D2P0DMB1 279 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 RPS27P42677 84 aaKnown RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 AP1ARQ63HQ0 302 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 H1FNTQ75WM6 255 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 TSPAN14Q8NG11 270 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 NSMAFQ92636 917 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ABTB1Q969K4 478 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZBTB8AQ96BR9 441 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 PTDSS2Q9BVG9 487 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 GABARAPL3Q9BY60 117 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 TAS2R16Q9NYV7 291 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ERVK-18Q9QC07 812 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 TVP23AA6NH52 213 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 TNFAIP8O95379 198 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 BGLAPP02818 100 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 HMGN1P05114 100 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 STSP08842 583 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ZNF43P17038 809 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 NAA10P41227 235 aaPredicted RBP9.16□□□□□ -0.94
NEK9-205ENST00000555405 PUDPQ08623 228 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 ACKR1Q16570 336 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 C9orf135Q5VTT2 229 aa9.16□□□□□ -0.94
NEK9-205ENST00000555405 SLX4IPQ5VYV7 408 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms