RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 C1orf140Q5VVS0 124 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 RTL6Q6ICC9 239 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 TMPPEQ6ZT21 453 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 PARP8Q8N3A8 854 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 LINC00471Q8N535 108 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 MBD3L2Q8NHZ7 208 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 FNDC9Q8TBE3 224 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 STK35Q8TDR2 534 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 FBLIM1Q8WUP2 373 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 CYGBQ8WWM9 190 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 OSTF1Q92882 214 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 GTPBP3Q969Y2 492 aaKnown RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 SDCCAG3Q96C92 435 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF845Q96IR2 970 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 POTEKPQ9BYX7 375 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 UCK2Q9BZX2 261 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 OR11A1Q9GZK7 315 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 KRT84Q9NSB2 600 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 C20orf141Q9NUB4 165 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ERRFI1Q9UJM3 462 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-218ENST00000555213 ZGRF1Q86YA3 2104 aa9.77□□□□□ -0.85
SHMT2-218ENST00000555213 IGKV1D-42A0A075B6H8 117 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 A0A1W2PNR3 127 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 CDC42EP2O14613 210 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 OR2T1O43869 369 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 OR10H3O60404 316 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 EIF1BO60739 113 aaKnown RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 PTP4A3O75365 173 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 ADAP00813 363 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 RPSAP08865 295 aaKnown RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 ENPP1P22413 925 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 RAD23AP54725 363 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 CTBP2P56545 445 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 OR2B6P58173 313 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 EFNB1P98172 346 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 EGR4Q05215 589 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 COX10Q12887 443 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 RNPS1Q15287 305 aaKnown RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TTC23Q5W5X9 447 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF730Q6ZMV8 503 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TMPRSS11FQ6ZWK6 438 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 NRMQ8IXM6 262 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 RNF113BQ8IZP6 322 aaKnown RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 SLC43A2Q8N370 569 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 RPRMLQ8N4K4 120 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 PFN4Q8NHR9 129 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 GNPDA2Q8TDQ7 276 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 SSC4DQ8WTU2 575 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TMEM239Q8WW34 195 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 ASB5Q8WWX0 329 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 HRASLS5Q96KN8 279 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 CNBD2Q96M20 576 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 NR1H4Q96RI1 486 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 PITX2Q99697 317 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TMEM43Q9BTV4 400 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 SLC19A3Q9BZV2 496 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 ENKD1Q9H0I2 346 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 PAPOLBQ9NRJ5 636 aaKnown RBP9.76□□□□□ -0.85
SHMT2-218ENST00000555213 GLRX2Q9NS18 164 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 AASSQ9UDR5 926 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TRAPPC4Q9Y296 219 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 POFUT2Q9Y2G5 429 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
SHMT2-218ENST00000555213 TRAV36DV7A0A075B6V5 113 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 TRIM64A6NGJ6 449 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ZAR1LA6NP61 321 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 DVL2O14641 736 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ZG16O60844 167 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 CRHP06850 196 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 TMIGD3P0DMS9 266 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 OSMP13725 252 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 GABRB1P18505 474 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FUT1P19526 365 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 AGAP20933 346 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 PTNP21246 168 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 CHRNB4P30926 498 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 RBM34P42696 430 aaKnown RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 CRISP1P54107 249 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FXYD6P3P58550 94 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 LTBQ06643 244 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 TSPAN31Q12999 210 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 KEAP1Q14145 624 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 MFSD13AQ14CX5 517 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 PTGES3Q15185 160 aaKnown RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 OR7A5Q15622 319 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FAM69AQ5T7M9 428 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF691Q5VV52 312 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 TMEM236Q5W0B7 351 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 TTC33Q6PID6 262 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 XKRXQ6PP77 449 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 FCRLAQ7L513 359 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 P3H2Q8IVL5 708 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 ZNF808Q8N4W9 903 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-218ENST00000555213 C10orf53Q8N6V4 93 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 C9orf106Q8NAJ2 232 aa9.75□□□□□ -0.85
SHMT2-218ENST00000555213 PIGXQ8TBF5 258 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms