RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 MEAF6Q9HAF1 191 aa13.43□□□□□ -0.26
NEDD1-207ENST00000555114 THUMPD1Q9NXG2 353 aaKnown RBP13.43□□□□□ -0.26
NEDD1-207ENST00000555114 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-207ENST00000555114 RPL36A-HNRNPH2H7BZ11 118 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 TM9SF1O15321 606 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 ANP32DO95626 131 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 GSNP06396 782 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 THBS4P35443 961 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 CDKN2CP42773 168 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 CRATP43155 626 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 CAPZA2P47755 286 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 CLDN17P56750 224 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 NPRL3Q12980 569 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 C1DQ13901 141 aaKnown RBP13.42□□□□□ -0.26
NEDD1-207ENST00000555114 ADRM1Q16186 407 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 COX20Q5RI15 118 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 CKAP2Q8WWK9 683 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 SLC25A36Q96CQ1 311 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 DOK1Q99704 481 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 AIG1Q9NVV5 245 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 HAO1Q9UJM8 370 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 USP22Q9UPT9 525 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 IFT52Q9Y366 437 aa13.42□□□□□ -0.26
NEDD1-207ENST00000555114 ANK2Q01484 3957 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 DSPPQ9NZW4 1301 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 RGS16O15492 202 aaPredicted RBP13.41□□□□□ -0.26
NEDD1-207ENST00000555114 NPIPB7O75200 414 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 C1QCP02747 245 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 IL6P05231 212 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 BCHEP06276 602 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 PNMTP11086 282 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 CDH15P55291 814 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 DSTNP60981 165 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 ARF1P84077 181 aaKnown RBP13.41□□□□□ -0.26
NEDD1-207ENST00000555114 HGFACQ04756 655 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 STX3Q13277 289 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 DAG1Q14118 895 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 ATG16L1Q676U5 607 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 C5orf46Q6UWT4 87 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 C12orf54Q6X4T0 127 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 LINGO2Q7L985 606 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 PIK3C3Q8NEB9 887 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 TEX37Q96LM6 180 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 OXGR1Q96P68 337 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 SORT1Q99523 831 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 SOX7Q9BT81 388 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 SPATA9Q9BWV2 254 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 NELFAQ9H3P2 528 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 SSU72Q9NP77 194 aaKnown RBP13.41□□□□□ -0.26
NEDD1-207ENST00000555114 RPS6KB2Q9UBS0 482 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 CMAHPQ9Y471 501 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 SPEF1Q9Y4P9 236 aa13.41□□□□□ -0.26
NEDD1-207ENST00000555114 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 IGHV2OR16-5A0A0B4J2B6 119 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 A0A0G2JPF8 293 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SH3PXD2BA1X283 911 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 TMEM229AB2RXF0 380 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 HNRNPCL2B2RXH8 293 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 HNRNPCL3B7ZW38 293 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SLCO1B7G3V0H7 640 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 AIM2O14862 343 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 OR2T1O43869 369 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 HNRNPCL1O60812 293 aaKnown RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 LILRA1O75019 489 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 HNRNPCL4P0DMR1 293 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 ITGA2P17301 1181 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 RPS5P46782 204 aaKnown RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 DVL1P1P54792 670 aaPredicted RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 POU3F1Q03052 451 aaPredicted RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 KRT71Q3SY84 523 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 MEX3DQ86XN8 651 aaKnown RBP13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SLC35B4Q969S0 331 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 TMEM109Q9BVC6 243 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 C20orf27Q9GZN8 174 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 RMND5AQ9H871 391 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SEC61A2Q9H9S3 476 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 CRLF2Q9HC73 371 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 GPR35Q9HC97 309 aa13.4□□□□□ -0.26
NEDD1-207ENST00000555114 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 ZNF99A8MXY4 864 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-207ENST00000555114 B4DSR2 109 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 FTCDNL1E5RQL4 147 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 CELA3BP08861 270 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 ADRA2AP08913 450 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 ETFAP13804 333 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 BGNP21810 368 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 IL12AP29459 219 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 VSNL1P62760 191 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 RIN1Q13671 783 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 CEACAM16Q2WEN9 425 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
NEDD1-207ENST00000555114 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms